- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S108.g14969.01.t
Possible name(s)
ACTG1; ACTR1A; ACTR1B
Gene model
Location
S108 [208,966 / 214,584]
Amino acid sequence
Length: 376
>Harore.CG.MTP2014.S108.g14969.01.p
MDTYDVIANQPVVIDNGSGVIKAGFAGDQVPKCHFSNYIGRPKHIRVMAGALEDSLFIGP
KAQEHRGLLSIRYPMEHGIVMDWNDMEHIWQYIYSKDQLQTFPEEHPVLLTEAPLNPRKN
REKAAEMFFETFNVPALFVSIQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSV
ERIDVAGRDVTRFLRILLRKEGHNFKTTAENEIVKTIKEKACYLAQNPQKEETAEQEKKS
YLLPDGSTIEIGSAKFRAPEVLFQPDLIGEECHGLHQVLCYCIQKCDMDLRRTLYQNIVL
SGGSTLFKGFGDRLLGEVKKLAPKDIKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK
KEYEEDGGRAVARKMF
Nucleotide sequence
Length: 3,208
>Harore.CG.MTP2014.S108.g14969.01.t
AGTCTAGTGATAATTGGTAATCTGGACGAAAATTTGTTGATGTAACTGCTTCCTATCTTG
ATAAACCTGCACGAATCATCTTTGGAAATCGAGACCCACAGTACCCTAGCTCGTTTGGAA
TCATGGACACCTATGACGTCATTGCCAATCAACCAGTCGTTATAGACAATGGTTCTGGAG
TCATAAAAGCTGGATTTGCCGGTGACCAAGTTCCAAAATGTCATTTCTCGAATTACATCG
GACGTCCAAAGCACATCCGTGTCATGGCTGGGGCATTAGAAGATTCCTTGTTCATTGGAC
CTAAAGCCCAGGAACACAGAGGGTTACTTAGTATAAGATATCCTATGGAGCACGGAATTG
TGATGGATTGGAATGATATGGAACACATTTGGCAGTACATATACTCAAAAGATCAGTTAC
AGACCTTCCCTGAAGAACATCCAGTCCTACTGACCGAAGCTCCTCTCAATCCACGTAAAA
ATCGTGAAAAAGCAGCAGAAATGTTTTTCGAAACATTCAACGTTCCGGCTCTCTTTGTTT
CTATACAAGCAGTACTTTCTTTATATGCCACCGGTAGAACCACTGGAGTCGTTCTGGATT
CCGGTGACGGCGTGACACATGCCGTTCCTATTTACGAAGGATTCGCCATGCCGCATTCAG
TTGAAAGAATTGATGTCGCAGGTCGTGATGTCACCAGATTTCTAAGAATTTTGTTAAGAA
AAGAAGGACATAATTTTAAAACAACGGCTGAAAATGAAATTGTTAAGACCATTAAAGAGA
AAGCTTGCTATCTTGCTCAAAATCCTCAAAAAGAAGAAACAGCAGAACAAGAGAAGAAAT
CATATTTATTGCCTGATGGAAGCACAATTGAAATTGGTTCTGCCAAGTTTCGAGCTCCAG
AGGTTCTATTTCAACCCGACCTCATTGGCGAGGAATGTCATGGACTGCATCAAGTACTCT
GTTATTGTATACAGAAATGTGATATGGATCTCAGAAGAACTCTTTACCAAAATATTGTCT
TGTCCGGTGGGTCTACGCTATTCAAAGGATTTGGAGATCGATTGCTAGGAGAAGTGAAGA
AACTTGCACCTAAAGACATTAAAATCCGTATATCAGCTCCGCAAGAGAGATTATATTCAA
CATGGATCGGTGGATCGATTTTAGCATCACTCGACACTTTCAAGAAGATGTGGGTGAGCA
AGAAAGAATACGAGGAGGATGGAGGTCGTGCCGTCGCACGCAAGATGTTCTGATTTGCAC
GTACAGATTTTTGATGTTTCCTAAAGACTATATTTTAAATTATAGTTCAATATTCGATGT
TCCTTGAAGCATGACATATGACCTGTTACCTGCTGGTCACAGGACAGTGGTTTTCTAATT
CTTGTACGTCTGTTATGTCGGTACATTCTCGTAAGCAATCTGAGAACACTGCGAACACAA
TGTTGCAACTAAATGTGGTTCAAAATTTCCAATTTCAAACTTGCTAAATTGAGCTGTTGG
TAGATTTTCTGAAATCTTCAAAGCAGTACATAAGTATTGAAAACAAATAATGTGTTGCAA
TTCTGTCCAATAATGTCATCGATATCGTTTTCAGGGTAATGCTGCTCGTAAGATTTGTCA
GTTCATTAAAAATATCCTGGACTCGCATAGATCAGGTTGGTGAATAGCTCCACCAAGCGA
CTCAATTATTTTTCAATTTTGCCGATCGTTACACAAGTCACGCCCAATGCATCATAAATA
ATGCAGATGTGGAATGCCTATCTAGTTCTAAGTTGCCTTTCTAAATGTTAGTGTAGTGAG
GTTTGTGTGATTCTAGGTCTCTGGTATAGCTGAAAGCCTAAACTTAAGAGAATATCGAGA
TGACATGTAATTTTCAAGAAAATTAGTAAAAATTGTTTTTTATGATTTAATTATTAATAC
AGTAGATGCTGCTTATAGTGATCGTTTTTGGACATTCTCTTCTTGATAAAAATACCGGCT
GTTAAAATTTGGTATTTTCGATTAATTTTAAATGGACCGATCGATTTTAATGGCAATACA
GAATTGATTGAATTTTCTGCGTTCATAATAAGCAGCTTTCACTGTATTTTAGTCTTCACT
GGTGTAAATGCAATGTTGAAGGGTATGTGTTGTGTATCGTATGCATAGATAGTAGAAATC
TGTATAATAAGTGTTACTGTAGAAGCATCCTCTGTGCTGTAAAACTATCATGAAATCATA
GATGGGTGATGAACGCATGATATTTTTATTATAATTATGGAATTATAAATATAATATAAA
AAATTGCTTGCAGTAAAACTAGCCTTATTCCTTTACCTCTAGTTTTTCTAATAGCATTCT
CCATAATTCTACATGTTTGTTGACAGCTGTGAGAAAAACCTCTTCGTACTATAGCAGTTG
GATTAACCTTGGAGATTGTATTATTGAATTTATTCAAATATCATTGGCCTACATGGGGTT
AAATTGTGAATTATATTAATAGCGTTTTAGGTTTTTGACTAGAACTGCTTAGTGATTCAA
AGTAATCTTGGTCCTAATTGTGATGTAAACTTTATCAGTTTCATATATTCATCAGATCCT
TCCTAGATCCATCCATCTATCCCTGATAAACCTACATCAGAGCAAGATCAGGCTTGTTTA
TTTTTCTCAGCCGAGTGGCAATTAGTCAATCCTCTGATGACCATCAGCTACAGATTGCTT
CTTAATATTGGTAAAAGACAAGGGTTTCAGAACATTTTTAGTGCCACATCATATACTTGA
CACATTTTTGTCGGCCAGAAGAAGAAAATTAGTTTTATGATTTCCATTGGGAATTTGTTC
ATAATGAAAATAATTCATTCGGTCAGAAATATTTCGACTGTCTAGTGGTCCAGATAAAAT
CTTGCATGCAGCTGGATTCAGTTTGGATACATACCGCTGGTATAAGCAATCACTCAAGAA
TTACATTAAAGAGAATAGAATTACGCCTACAACATTACGTCTGATTAAAGTAACTTGACT
TAATCATTTAAAAGAATTAGTTCAAGAATTTTTACCTAATTCAATTAGAAACGAATTTAA
AAACTTAAGGGAATTTATTTCTAGGCCTTGTTGCATAAGTAACTTTCATGATCATGTAAA
TGTCGGTGATCACTCCGTAGTATTATTGTTGTTACTTCCAAATGCTTTTTTACAAGTCAC
CTAATACAATGTTAACAATAATGCATGA
| PANTHER |
Arp1 (IPR029909) - T[1-374] 2.6E-220 |
| PANTHER |
Actin (IPR004000) - T[1-374] 2.6E-220 |
| SMART |
Actin (IPR004000) - T[9-376] 6.7E-200 |
| Pfam |
Actin (IPR004000) - T[9-375] 3.6E-132 |
| PRINTS |
Actin (IPR004000) - T[53-64] 4.9E-32 - T[65-87] 4.9E-32 - T[120-133] 4.9E-32 - T[145-164] 4.9E-32 - T[237-253] 4.9E-32 |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[109-121] . |
| ProSitePatterns |
Actin_CS (IPR004001) - T[357-365] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 55.556 % | 446 | 2.89E-157 |
| ACTY_HUMAN | 81.117 % | 659 | 0 |
| ACTZ_HUMAN | 82.713 % | 667 | 0 |