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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C14.209.v1...' > 
  2. Clone 'cijv049n18' > 
  3. Transcript 'Moocci.CG.ELv1_2.S48...' > 
  4. Transcript 'Moocci.CG.ELv1_2.S58...' > 
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S107.g10313.02.t

Possible name(s)

VPS29

Gene model

Harore.CG.MTP2014.S107.g10313

Location

S107 [208,550 / 209,679]

Sequences

Amino acid sequence

Length: 184

>Harore.CG.MTP2014.S107.g10313.02.p
MVLVLVTGDMHIPHRSCGLSPKFKKLLVPGKIQHILCTGNLCNKESYDYLKTLASDVHVV
RGDFDDISNNYPEQKVVTVGQFRVGLVHGHQIVPWGDSESLAMLQRQLDVDILIFGHTHK
FEAYEQENKFYINPGSITGSFSPLTSEVIPSFVLMDIQSNTVVTYVYQLENGKDVKVERI
EFKK

Nucleotide sequence

Length: 555

>Harore.CG.MTP2014.S107.g10313.02.t
ATGGTTCTCGTACTTGTTACTGGCGATATGCACATTCCTCATCGCTCATGTGGTCTATCT
CCAAAATTCAAGAAACTCCTGGTCCCAGGAAAAATCCAACACATCCTTTGCACGGGGAAT
TTATGCAACAAGGAATCGTATGATTATCTCAAAACGCTCGCCAGTGACGTACACGTAGTT
CGTGGCGATTTTGATGATATTTCGAATAATTATCCGGAACAAAAAGTTGTTACAGTTGGA
CAATTTCGAGTTGGATTAGTTCATGGTCACCAGATCGTGCCATGGGGAGATTCTGAGAGT
CTGGCCATGTTGCAGCGACAACTCGATGTGGACATCCTCATCTTTGGTCATACTCATAAA
TTCGAAGCCTATGAGCAAGAAAATAAATTTTACATAAATCCAGGAAGTATCACAGGTTCC
TTCTCTCCACTGACAAGCGAAGTAATTCCGTCCTTTGTTCTGATGGATATTCAGTCCAAT
ACTGTAGTAACCTACGTCTATCAACTGGAAAATGGAAAAGATGTCAAAGTGGAGAGAATA
GAATTCAAAAAGTGA

InterProScan

Gene3D
Metallo-depent_PP-like (IPR029052) - T[1-184] 2.0E-79
PANTHER
Vps29 (IPR028661) - T[1-184] 3.4E-83
PANTHER
Phosphodiesterase_MJ0936/Vps29 (IPR000979) - T[1-184] 3.4E-83
TIGRFAM
Phosphodiesterase_MJ0936/Vps29 (IPR000979) - T[3-157] 6.5E-33
CDD
Vps29 (IPR028661) - T[3-182] 4.135E-122
Pfam
Calcineurin-like_PHP_lpxH (IPR024654) - T[4-159] 6.5E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VPS29_HUMAN 77.049 % 295 8.99E-104