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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Cisavi.CG.ENS81.R167...'
  4. Transcript 'KH2012:KH.C2.216.v2....'
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S107.g10313.01.t

Possible name(s)

VPS29

Location

S107 [208,504 / 209,886]

Sequences

Amino acid sequence

Length: 184

>Harore.CG.MTP2014.S107.g10313.01.p
MVLVLVTGDMHIPHRSCGLSPKFKKLLVPGKIQHILCTGNLCNKESYDYLKTLASDVHVV
RGDFDDISNNYPEQKVVTVGQFRVGLVHGHQIVPWGDSESLAMLQRQLDVDILIFGHTHK
FEAYEQENKFYINPGSITGSFSPLTSEVIPSFVLMDIQSNTVVTYVYQLENGKDVKVERI
EFKK

Nucleotide sequence

Length: 808

>Harore.CG.MTP2014.S107.g10313.01.t
TTTAATTCTGTTTTTTATTAATTAACAGCTCTTAGTTAATAGCAGTATGGTTCTCGTACT
TGTTACTGGCGATATGCACATTCCTCATCGCTCATGTGGTCTATCTCCAAAATTCAAGAA
ACTCCTGGTCCCAGGAAAAATCCAACACATCCTTTGCACGGGGAATTTATGCAACAAGGA
ATCGTATGATTATCTCAAAACGCTCGCCAGTGACGTACACGTAGTTCGTGGCGATTTTGA
TGATATTTCGAATAATTATCCGGAACAAAAAGTTGTTACAGTTGGACAATTTCGAGTTGG
ATTAGTTCATGGTCACCAGATCGTGCCATGGGGAGATTCTGAGAGTCTGGCCATGTTGCA
GCGACAACTCGATGTGGACATCCTCATCTTTGGTCATACTCATAAATTCGAAGCCTATGA
GCAAGAAAATAAATTTTACATAAATCCAGGAAGTATCACAGGTTCCTTCTCTCCACTGAC
AAGCGAAGTAATTCCGTCCTTTGTTCTGATGGATATTCAGTCCAATACTGTAGTAACCTA
CGTCTATCAACTGGAAAATGGAAAAGATGTCAAAGTGGAGAGAATAGAATTCAAAAAGTG
ATCAATTCCAATTTTGAAGCAGACTTTGGCTCACTATCATCGATCCATTTCATGATGTCA
TTGAATTATAACTGGACTCTCATTGCAGTATTGCGGTGTTGGTCTTGTCATTCTGCTCTT
GTAGCCATTATATTATTCTTATTATTAGGCCCAAAGTCCAATTGATTTTTTAATAGCTTA
TACAGATTTAGATTCCTATAGTCATGGC

InterProScan

Gene3D
Metallo-depent_PP-like (IPR029052) - T[1-184] 2.0E-79
PANTHER
Vps29 (IPR028661) - T[1-184] 3.4E-83
PANTHER
Phosphodiesterase_MJ0936/Vps29 (IPR000979) - T[1-184] 3.4E-83
TIGRFAM
Phosphodiesterase_MJ0936/Vps29 (IPR000979) - T[3-157] 6.5E-33
CDD
Vps29 (IPR028661) - T[3-182] 4.135E-122
Pfam
Calcineurin-like_PHP_lpxH (IPR024654) - T[4-159] 6.5E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VPS29_HUMAN 77.049 % 295 8.99E-104