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TRANSCRIPT CARD

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  1. EST 'AHC0AAA53YH21_RM1' > 
  2. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S107.g06022.01.t

Possible name(s)

MMS19

Gene model

Harore.CG.MTP2014.S107.g06022

Location

S107 [49,631 / 54,745]

Sequences

Amino acid sequence

Length: 1,105

>Harore.CG.MTP2014.S107.g06022.01.p
MDDLVESYMGDDGSDHNGIVSKIMSGHSSFLDMIESLQQHLTSTEVDKRIKACELISNVL
TNLNKSIIKPQESAAIISFLCCRLQDHFSVHSAALAALAVMSSYDNLPLGSAELILRTIF
KEVHAPSYMQTVRRSIYVIISGLLENYKQEVLAMGGDFVYSFISIVDGEQDPRNLLHVFD
LAYDIIKTGFDISKCVEEFFDVISCYFPIDFEPPTSLTDRKVITNEQLVQGLRKVISSTH
LFAPHCIPLMIEKMESNVLKAKLDSMSTLKECLKIYSVVDLRMFLRSLWICIRREIMYAE
AEDVETIGQFLITDIVSILSKSPHSSSGESNPELNSFIKDVLEECLPKLTGQLQEKISWS
SAKLLIACAKASKVPCSKLFSVVLPLLINNLKNKNLNIAERRLTMEILVNVLKTISEFEF
TEGLEFHPLHDHNNEVVEIICSCIDSDSFQLLRTVAFAGLAALCDHGSVLSAENKLKMVQ
SIVFCIKHEQNDQLTADLRAAAGYLSMKWSDLAVDYIFPVLSKSVKNFFISDMVSLKKDL
LYLSSISTHPDVIKVVSELLLKAILSETVNEKTSGRYEMVLDCVSDIVNANAGDHKCIKY
FSDALVLPLVNVCVKMSLVPVLPEQCCSCCSELQNFSSKCVTQPVIQKVANILRTLCQNM
KPDKRAQDICDALTTIFVDCNLKCLDIESAESYTFSPLTSVKQTLQTRLISLLVATQCSF
VMDVKIKCMDVLLDRLLSLSQNTMDHLSYVSASKCIAGLLNKHKVVPEDFMNKVLKLGEG
IAHRTSGQEGEVSEATSVRTLSLLVWFVKCLVLRSHEKTMEFTSILFSLFSDRNLGRMSA
DSFDIILRDTDEVLNSASHAMIRLMYRQRFFQSALPTLIDGFRAVENDSNGESAMETNQT
TNTDSSATKANYLTALSHFLMYLPKQVLHQHLASLLPMLVKSLKSSEGPLLESVLSTLYS
LVQEDKSSIEPHAGMLLDHFLELASFPSYVPVRIKACSCIGVMTLLQVSVILPHKPKIIK
ALAKPLNDKKRLVRKEASKARSEWCLLGDVLISNYNDLLPNSRIEDKSLPQKLLKSIFRR
SIFLFVEQYFKQELNCTTLRFNECR

Nucleotide sequence

Length: 3,404

>Harore.CG.MTP2014.S107.g06022.01.t
AGTCAAGTATTATTTGAAAAGTATTTAAATAATAAATTGTGCAATAGTATCCCGAGAACA
GAATATTACACTCCTAAATTGCGGGTATGGATGATCTGGTTGAAAGCTATATGGGAGATG
ATGGATCAGATCATAATGGTATTGTGTCAAAGATAATGAGTGGGCATTCGTCCTTCCTAG
ACATGATTGAATCTCTACAACAGCACCTGACCAGTACCGAAGTTGATAAAAGAATAAAGG
CTTGCGAGCTCATTTCAAACGTGCTTACTAACCTCAACAAGAGCATCATAAAACCTCAAG
AATCAGCAGCGATCATAAGTTTCCTGTGCTGTCGTCTCCAGGATCACTTTTCTGTGCATT
CGGCCGCTTTAGCTGCTTTAGCTGTAATGAGTTCGTATGATAATCTTCCTCTGGGATCTG
CAGAACTGATCCTAAGAACTATATTCAAAGAGGTCCATGCGCCTTCGTATATGCAGACTG
TGAGGCGTTCTATATACGTTATTATTTCAGGGCTTCTGGAGAATTACAAGCAGGAGGTAT
TAGCTATGGGTGGTGACTTTGTTTATAGCTTTATTTCGATCGTTGATGGGGAACAAGACC
CCCGCAATCTGTTACATGTCTTTGACTTGGCGTACGACATAATCAAAACCGGCTTCGACA
TATCTAAGTGTGTGGAAGAATTTTTTGACGTTATCAGTTGCTATTTTCCTATCGATTTTG
AACCACCGACCAGTTTGACGGACAGAAAAGTGATCACAAACGAACAACTTGTTCAGGGGT
TGAGGAAGGTCATATCCTCCACGCACCTGTTCGCACCGCATTGTATTCCGCTCATGATAG
AAAAAATGGAATCGAATGTCCTGAAGGCTAAGCTAGATTCTATGAGTACTCTGAAAGAGT
GTCTTAAGATATACTCTGTTGTCGATTTAAGAATGTTTTTGAGATCACTTTGGATTTGCA
TCAGACGTGAGATCATGTATGCCGAGGCAGAAGATGTAGAAACGATTGGTCAATTCCTGA
TAACGGATATCGTGTCAATCTTATCAAAATCACCCCATTCGAGCAGCGGAGAATCGAATC
CCGAACTCAATTCCTTCATAAAAGATGTTCTAGAAGAATGTCTTCCAAAGTTGACCGGAC
AACTGCAGGAAAAAATATCCTGGTCTTCTGCCAAATTGCTAATTGCATGTGCCAAAGCCA
GTAAGGTGCCTTGTAGTAAGCTGTTTAGTGTGGTTTTGCCTCTTCTAATCAATAACTTAA
AAAACAAGAATTTGAATATTGCTGAAAGGAGATTAACCATGGAAATACTAGTCAATGTCC
TGAAAACCATATCAGAGTTCGAATTCACAGAGGGTCTTGAATTTCATCCTTTGCACGACC
ATAATAATGAGGTGGTTGAGATTATTTGTTCGTGTATAGATTCGGATTCGTTCCAGCTGT
TACGAACGGTCGCATTCGCAGGATTGGCTGCGTTGTGCGATCACGGTTCTGTTTTGTCTG
CAGAAAACAAACTTAAAATGGTGCAGAGCATTGTATTTTGCATAAAACACGAACAGAACG
ATCAGCTAACTGCTGACCTCCGAGCCGCTGCCGGATATCTCTCTATGAAGTGGTCAGATT
TAGCAGTCGACTACATATTCCCTGTTCTTTCTAAATCTGTGAAGAACTTTTTCATCAGCG
ATATGGTTTCATTGAAGAAAGATCTTCTATATCTTTCCTCCATTTCAACCCATCCAGACG
TGATCAAAGTTGTGTCCGAACTTCTTTTGAAAGCGATTCTTTCGGAAACCGTCAACGAGA
AAACATCGGGCCGCTACGAAATGGTTTTAGATTGTGTCTCTGATATAGTAAATGCCAACG
CCGGGGACCATAAGTGCATCAAATATTTTTCTGATGCCCTCGTACTTCCGCTGGTTAACG
TGTGTGTCAAAATGTCGCTCGTTCCCGTGCTTCCCGAACAGTGTTGTTCATGCTGTAGCG
AGTTGCAGAATTTTTCAAGTAAATGCGTCACACAGCCAGTAATTCAAAAGGTTGCCAACA
TACTCAGAACCTTATGCCAAAATATGAAACCGGATAAACGTGCTCAGGATATCTGTGATG
CCTTGACTACCATTTTCGTGGACTGTAATTTAAAATGCCTTGACATCGAATCAGCAGAGT
CATACACTTTCAGTCCTCTGACATCTGTTAAACAGACTCTACAAACCCGTCTCATCTCTT
TGCTAGTTGCCACCCAATGTTCTTTTGTCATGGACGTGAAAATTAAGTGCATGGATGTTT
TGCTGGATAGATTGCTTAGTCTGTCGCAAAACACAATGGATCACCTGTCCTATGTATCTG
CCTCCAAGTGCATCGCAGGTTTATTGAACAAGCATAAGGTTGTTCCAGAAGATTTCATGA
ACAAGGTTTTAAAACTTGGGGAAGGTATAGCTCATCGAACATCCGGTCAAGAAGGTGAAG
TGAGTGAAGCTACCTCAGTCCGAACGTTGAGTTTACTGGTTTGGTTCGTCAAGTGCCTCG
TGCTTCGTTCCCATGAAAAAACAATGGAGTTTACCAGCATCCTCTTTAGCCTTTTTTCAG
ACAGAAATTTGGGCAGAATGTCAGCTGATAGCTTTGACATTATCCTTAGGGACACTGATG
AGGTTCTAAATTCGGCTTCTCATGCCATGATTCGTTTAATGTATCGCCAGAGATTCTTCC
AATCTGCTTTGCCAACTCTTATCGACGGTTTCCGGGCAGTCGAGAATGATAGCAATGGGG
AATCAGCCATGGAAACTAACCAGACTACCAACACAGATTCATCTGCCACTAAGGCAAATT
ATTTAACAGCCCTTTCACATTTTTTGATGTATCTTCCAAAGCAGGTACTTCATCAGCATC
TTGCAAGCCTGCTCCCAATGCTTGTCAAATCTTTGAAGAGCAGTGAAGGTCCATTGCTTG
AGTCAGTTTTGTCTACACTGTACAGCCTTGTTCAAGAAGATAAGTCATCCATAGAACCTC
ACGCAGGGATGCTTCTGGATCACTTCCTCGAACTCGCATCATTTCCCTCCTACGTTCCAG
TGCGAATTAAGGCCTGCAGTTGCATTGGGGTTATGACGCTTCTTCAGGTCAGTGTGATTC
TACCTCACAAACCAAAGATCATCAAGGCATTAGCGAAACCATTGAATGACAAGAAACGTC
TGGTTCGTAAAGAGGCCTCCAAAGCCCGTAGTGAATGGTGTTTGCTAGGAGACGTATTGA
TATCAAACTACAACGATTTATTACCCAACAGTAGAATTGAAGATAAAAGCTTACCACAGA
AATTACTGAAAAGCATATTTCGAAGAAGCATATTTCTCTTTGTTGAACAATACTTTAAAC
AAGAGTTAAATTGCACAACTCTTAGGTTTAACGAATGCAGGTAA

InterProScan

SUPERFAMILY
ARM-type_fold (IPR016024) - T[30-149] 4.57E-26 - T[335-471] 4.57E-26 - T[651-687] 4.57E-26 - T[729-775] 4.57E-26 - T[844-1049] 4.57E-26
Pfam
MMS19_C (IPR024687) - T[537-983] 1.5E-68
Gene3D
ARM-like (IPR011989) - T[893-1045] 5.7E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MMS19_HUMAN 32.795 % 458 1.04E-143