- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S1070.g10475.01.t
Possible name(s)
RDH12; RDH13
Gene model
Location
S1070 [4,065 / 5,025]
Amino acid sequence
Length: 319
>Harore.CG.MTP2014.S1070.g10475.01.p
MAEKPVETVIRGWVNPEIKIPGKTVVITGANTGIGLATAVDLAKREARVIIACRNMEKGE
EAKKKIVEESKSENVVLKKLDLSSFESIREFAADINATESRLDVLINNAGVMMCPQSETK
DGFELQFGVNHMGHFLLTNLLLDLIKRSAPSRIVTVSSMAHHRWFGTSMQWNDLNMRKNY
ESTLAYGQSKLCNVLFSRELSKKLQGTGVTSNSLEPGAVKTDLQRHVGTLSWPTFRDYLA
SIGNYLTRWFYRTPEKGAQSSIYLTVAPELVEASGNFYANCKQTGESYDAKNDDYAERLW
KMSEEFVGMKKKREEGGAE
Nucleotide sequence
Length: 960
>Harore.CG.MTP2014.S1070.g10475.01.t
ATGGCTGAAAAACCCGTGGAAACAGTCATCAGAGGTTGGGTGAATCCAGAAATCAAAATT
CCTGGCAAAACTGTGGTCATAACAGGAGCTAATACTGGAATTGGTTTAGCAACTGCAGTG
GATTTGGCCAAGAGAGAAGCGAGAGTTATTATCGCTTGCAGGAATATGGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTTGAAGAATCAAAATCAGAAAATGTTGTTTTGAAGAAACTC
GATCTCTCGTCGTTTGAATCTATTCGAGAATTTGCCGCTGACATCAATGCTACCGAATCT
CGACTGGATGTTCTCATTAATAACGCAGGGGTGATGATGTGCCCGCAATCCGAGACCAAG
GATGGGTTCGAGCTGCAGTTTGGGGTCAATCATATGGGGCATTTTCTGTTGACAAATTTG
CTTTTGGATTTGATAAAGAGAAGTGCTCCAAGCAGGATCGTGACTGTATCATCTATGGCT
CATCACAGATGGTTCGGAACTTCAATGCAATGGAACGATTTGAATATGAGGAAAAATTAT
GAGTCAACTCTAGCTTATGGTCAAAGCAAGCTATGTAATGTGCTTTTCTCTAGAGAGTTG
AGCAAGAAGCTGCAAGGTACTGGTGTTACATCAAATAGTTTGGAACCTGGAGCTGTTAAG
ACAGATTTACAGAGGCATGTTGGAACCCTCAGTTGGCCAACATTCCGGGACTATCTCGCA
TCCATTGGAAATTATTTAACAAGATGGTTTTATAGGACCCCAGAAAAAGGGGCTCAAAGC
TCGATTTACTTAACGGTTGCTCCGGAGCTCGTCGAAGCCAGTGGGAATTTTTACGCCAAC
TGCAAACAGACGGGAGAGTCATACGATGCAAAGAATGATGATTATGCCGAGAGATTGTGG
AAAATGAGTGAAGAATTTGTTGGAATGAAGAAGAAAAGAGAGGAAGGAGGCGCAGAGTGA
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[21-284] 5.19E-57 |
| Pfam |
SDR_fam (IPR002347) - T[23-161] 1.6E-27 |
| PRINTS |
SDR_fam (IPR002347) - T[24-41] 6.4E-19 - T[100-111] 1.0E-5 - T[100-111] 6.4E-19 - T[145-161] 6.4E-19 - T[151-159] 1.0E-5 - T[186-205] 1.0E-5 - T[186-205] 6.4E-19 - T[207-224] 6.4E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH11_HUMAN | 46.644 % | 260 | 7.52E-86 |
| RDH13_HUMAN | 49.342 % | 265 | 1.32E-87 |
| RDH12_HUMAN | 48.505 % | 264 | 3.41E-87 |
