- Transcript 'KH2012:KH.L9.32.v1.A...' >
- Transcript 'KH2012:KH.C1.263.v1....' >
- Transcript 'KH2012:KH.C3.896.v1....' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S105.g01421.02.t
Possible name(s)
IPO5; KPNB1; TNPO1
Gene model
Location
S105 [129,294 / 139,403]
Amino acid sequence
Length: 880
>Harore.CG.MTP2014.S105.g01421.02.p
MATLVQILDKTVSPDPKELNEAQAFLEHAAQENLAGFLVGLCQVLASPVNSQVSRMAAGL
QVKNYITSKDQTVKTQHQQRWLALDENSKNEVKKLVLQALGTESTRPSSAAHVIAGIACA
EIPRGQWQELIPNLVQYVTAENSTEQVKEAALEAIGYICADMELTHLLVHANIILTAIVQ
GMRKQEPSYHVKLAATNAMLNSLEFTSANFEKETERHFIMQVICEATQMDDAKGEIRVAA
LQCLVKIMSLYYQYMETYMGPALFAITVEAMKSNDDNVCLQGIEFWSNVCDEELDLSIEM
AEAEEMGRPPERTSKFYAKGALPYLIPILTNILAQQDEMDDEDDWNPSKAAGVCLMLLAT
CCENDVIQHVVPFIEKHINNTDWRFRDGAVMALGSILEGPSPDQLSPILEQGMPTFIKLL
KDDCVVVRDTTAWAIGRICELIPETVINEKYLMILLEAMIESLTAEPRVATNICWAFSSL
AEAAYDVASGNGGEEPETYMMSKVYENIIQKLLLTTERNDGHQNNLRSSAYEAVMEMIKN
SPKDCYDTVLKTTTHIMQRIHDLLNMETHIQSSSDRSHYNDLQSLLCATLQSVLRKVKQE
HVASIADNVMGSLLRMLSSGSGGVQEDALLAVGTLIEVVGENFVAYMPAFKEYLFSGLRN
HAEYQVCIVAVGVVGDICRAIGHKIMDHCDAIMTALLENLSDANVHRSVKPHILSVFGDI
ALAIGPDFKKYLEIVLGTLQQAAQAQVDKSDYDMVDYFNELREGCLETYTGIIQGLKGDK
KELSADVFLLKDHIHFMLLFVESIAMDEDRSEGVVAAAAGLIGDLCTAFGQTYGPTLLGY
LDAKPKISDLLTEGRRSKTSKTKSLAVWTTKEIRKLRSKA
Nucleotide sequence
Length: 4,045
>Harore.CG.MTP2014.S105.g01421.02.t
AGATTCGAGGTTAAATTTGGCGAAATCTGTTTCTTTGATAATTTTTCATTTCATGGTGAT
CGTTTTAGTCCAGCGAAAGATAATCAACCACCACCATGGCCACTCTCGTCCAAATATTAG
ATAAAACTGTCTCTCCAGATCCGAAGGAGCTAAATGAAGCCCAGGCCTTTCTTGAGCATG
CAGCCCAAGAAAATCTGGCAGGCTTTCTAGTAGGCCTTTGCCAAGTGCTAGCGTCGCCGG
TGAATAGCCAGGTCTCTCGCATGGCTGCCGGTCTGCAGGTGAAAAATTATATCACATCAA
AAGATCAAACAGTAAAAACGCAACATCAGCAACGTTGGCTTGCTTTGGATGAAAATTCAA
AGAATGAAGTTAAAAAACTGGTTCTTCAAGCCTTGGGAACTGAATCAACACGACCTTCCT
CTGCTGCCCACGTCATTGCTGGGATTGCATGTGCTGAGATTCCTAGAGGACAATGGCAAG
AATTGATCCCTAACCTTGTACAGTATGTGACAGCAGAGAATAGTACCGAGCAAGTCAAGG
AAGCTGCTCTTGAAGCTATTGGATACATTTGTGCTGATATGGAACTGACTCACTTGCTGG
TACACGCCAACATAATTCTGACCGCAATCGTTCAAGGGATGAGGAAGCAAGAGCCAAGCT
ATCATGTCAAACTTGCAGCAACGAATGCTATGCTCAACTCTTTAGAGTTTACAAGCGCTA
ATTTTGAGAAAGAGACCGAGAGACACTTCATCATGCAAGTCATTTGCGAAGCCACTCAAA
TGGACGATGCAAAGGGAGAGATCCGTGTTGCTGCCTTACAATGCCTCGTGAAGATAATGT
CGCTGTATTATCAATACATGGAGACCTATATGGGGCCTGCACTTTTTGCTATTACTGTGG
AAGCCATGAAATCCAACGATGACAATGTCTGTCTCCAAGGAATTGAATTTTGGTCGAATG
TTTGTGACGAAGAGCTTGATTTATCGATCGAAATGGCCGAGGCAGAAGAGATGGGACGAC
CGCCAGAAAGGACTAGCAAGTTTTATGCCAAGGGAGCCCTGCCATATCTCATTCCTATAT
TAACGAATATACTTGCGCAGCAGGATGAAATGGACGACGAGGATGACTGGAATCCTTCGA
AAGCGGCCGGAGTTTGTCTCATGCTCTTGGCCACGTGCTGCGAAAACGACGTCATTCAGC
ATGTGGTTCCTTTCATAGAGAAGCATATTAACAATACTGACTGGAGGTTCAGGGATGGAG
CTGTAATGGCATTGGGGTCTATTCTGGAAGGACCATCACCTGATCAACTGAGTCCAATTT
TGGAACAAGGCATGCCAACCTTCATCAAGCTTCTGAAGGACGATTGCGTGGTCGTTCGTG
ACACTACAGCATGGGCTATCGGACGAATCTGTGAGCTGATTCCAGAGACGGTCATCAATG
AGAAATATCTTATGATCTTGCTTGAAGCAATGATTGAGAGTTTGACTGCTGAGCCGAGAG
TCGCTACTAATATTTGTTGGGCGTTTTCATCACTAGCCGAAGCAGCATACGATGTTGCTT
CTGGCAATGGTGGCGAAGAGCCAGAAACCTACATGATGAGCAAAGTTTATGAGAATATCA
TACAGAAATTGCTCCTTACAACAGAGCGGAATGACGGCCACCAGAACAACTTGCGCAGCT
CGGCATACGAGGCTGTCATGGAGATGATCAAGAACAGTCCGAAAGATTGCTACGACACCG
TTCTGAAAACAACAACTCATATCATGCAGAGAATACATGATCTTCTTAACATGGAGACCC
ACATTCAATCGAGCAGCGATCGATCACATTACAACGATTTACAGTCTCTCTTGTGCGCCA
CCTTGCAGAGTGTCTTACGTAAGGTTAAGCAGGAACATGTCGCATCCATTGCAGACAATG
TCATGGGCTCCCTTCTTCGGATGTTGAGTTCCGGTTCAGGAGGTGTTCAAGAGGACGCCT
TGCTCGCAGTGGGAACACTCATCGAAGTTGTGGGAGAAAACTTTGTTGCATACATGCCTG
CATTTAAAGAATATCTCTTCTCTGGATTGCGCAATCATGCTGAATATCAGGTGTGCATTG
TTGCTGTCGGGGTAGTTGGTGACATCTGCCGTGCAATCGGCCACAAAATCATGGACCACT
GCGACGCCATCATGACCGCTCTTCTCGAGAACCTGTCAGATGCCAACGTACACCGCAGCG
TCAAGCCCCACATACTGTCAGTGTTTGGAGACATCGCACTGGCTATCGGACCGGACTTCA
AGAAATATCTGGAGATTGTGCTTGGGACTCTGCAACAAGCAGCGCAAGCTCAAGTGGACA
AGAGTGACTACGACATGGTGGATTATTTCAATGAGCTCCGAGAAGGCTGTTTGGAGACAT
ATACGGGCATCATTCAGGGTCTTAAAGGAGATAAAAAAGAGCTGAGTGCGGATGTCTTCT
TGCTCAAAGATCACATTCATTTCATGCTTCTCTTTGTCGAATCCATCGCCATGGACGAAG
ACCGTAGCGAAGGAGTCGTAGCTGCGGCAGCTGGGCTTATTGGTGATCTTTGTACCGCCT
TTGGACAAACGTACGGTCCCACTTTGTTGGGGTACCTGGATGCCAAGCCGAAGATTAGCG
ACCTTCTGACGGAAGGCAGACGATCAAAGACAAGCAAGACGAAGAGTTTGGCGGTGTGGA
CCACTAAAGAAATTCGCAAGCTGCGTAGCAAGGCATGAAACTGGGATGCCGCTAATGAGA
CTTACGAGAGATTGGTTTAATGTTTATGGTTGTTTTTGCGATGTTGCCTGAACTTGAGTT
CCTTTTGGCATCTTCCTCCTATCCTGCAATCTCCTGACTGACTGTTCCTGGATGAAGGAT
GTAAATCTTTGCCCATCTGTTTCCCGTAGCCTGAGAGTGCTCTTGCTGTTGTTGCCCTCT
TGAGTGATGATGATGTGAGACTTGTGTTGCCGTTGTATGATTGCGTAAAGTGCAAGAAAC
GTTTTATTCCGAACCACTGCGTCATTGTGAGAATCCCTGCAAAAATCTTGCCCAGATACA
GCTCCTCTTCCCTTAGCTCGTTATGCTGTGTGGCGTCCCGGCGGGAAAGATAAACTCAGC
ATTGAATGGTTGAATTTTCCTGAATTAGCCAATTTTTTCAGTAGAATTTCTAAAAGAAAG
GTAATTAATTGCCTTGTGGTTCCATAAATTTTATTCCTCAATAAGTTTTTTGACATACAA
GCTGGGTCGATGACGTATTTAATTCTGTTCCATATATTTAAGTCGTTTCGTTCATTGATT
TTTGGTCGTCTGCGTGTGCCTTCTTACTAATTGCGGTTGCTGAACACTGTTGTTTGCATG
TATGTTATCTAAGTTTCCTTGTACGATTTTTATTACCTGCGATGCCTAGTTCCCGTCTCC
AACTCCTGCGTGTGTTGTGGTCGTGTATTTTGTGGTTGCGTGCTCTATTCGTTGCCGTCA
CTGTATGCATCAGAGCGTGAAATAGCGTAATGCCGCTTTTTTCTATTTATTACGAGTTTT
GTTTATGACCATATTACTTCTAGCGGTTCTGGGCCGATTGGCGTGTTTTCTAAAATTGTG
ATTGTCCTGAAACCTCCTCATCTTTAGTGGTGCCTGTGTACAGAGCTCTTGTATTATTAT
TATCTACTTCCCCAGTTATTCATTCAATTCGGTCGAGTGTAGCTACATCCCAGCGCTAGT
TTGCTGTAGAATTAATTTTTTTTTTCTTATTAGGCATTGAATTTGAAATAAGCGTTTAGC
ATCACCTTAACCTTCTATAGTCGAACCAGAGCGATAATATAAAACTGGAATGCTACTTAT
TGCTACAAAAAATAAAGAACTGTATTACCATAACACATTTTGCAGTATCTTGTTTTTACT
ATTCTGTAACAGTTACTGTAATTGCATACATACAGGGTGTCCCAAAATATGTAGACACAC
TTCGAATGATTATTACTTGATCAAAACTTTTATCTGGACTTACTGTTTATAAGTTCATTT
GTAAGCGTTGATTGTACTTTGCCAT
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[4-875] 2.52E-172 |
| Pfam |
Importin-beta_N (IPR001494) - T[22-102] 1.9E-9 |
| ProSiteProfiles |
Importin-beta_N (IPR001494) - T[22-102] 19.979 |
| SMART |
Importin-beta_N (IPR001494) - T[22-102] 1.3E-8 |
| SMART |
Armadillo (IPR000225) - T[119-160] 180.0 - T[354-398] 430.0 - T[401-440] 0.023 - T[598-637] 190.0 |
| Gene3D |
ARM-like (IPR011989) - T[128-880] 0.0 |
| ProSiteProfiles |
HEAT_type_2 (IPR021133) - T[412-450] 9.281 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IMB1_HUMAN | 67.159 % | 1213 | 0 |