- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S1059.g04169.01.t
Possible name(s)
SRP72
Gene model
Location
S1059 [3,628 / 10,713]
Amino acid sequence
Length: 820
>Harore.CG.MTP2014.S1059.g04169.01.p
MQLYYEIVLSTIANFIICYHPNPNLIQNINTTYPRFFILKTIVDIYFDLCLVVKSDLFLL
SLRTCIICGRQLAHNICTDVLYFVRCRCLYIPSKYNRPISSDITIMSSTTSSPLTGMFAE
LNKTLQVNDYKQALKLCNKIIHSKEGNTDEKAMHCKVVCMINLNQFAEALKFIKSTPEIT
SSLIFERAYSQYRLIQTDEALETIKEAKELDVRLTELKAQVLYKLGYYDESFELYKRLIK
ECSDDYEDERKSNLIAVHASNTLWKKKQQVDVELELTSYEQMYNKSCKLLGDGDAAGAIG
LLEDALENCKAYYEDDSDMTEEDIEGEVAVIKVQMGYALQLQGKEDEALQLYNQVIKSRP
DDIGLVAVASNNIITINREQNVFDSKKKLKATMVQGLRQKLVLKQLIVIDMNRALLYLYS
NQWEMCKKVLKSLQQENKSDDVPCLIQAVQLCREKNYEKAISFLEDFIETHSDPDVHSID
LANIKLALVQILLGQGKVERVCAILESMHEIKYTPGIMSILVALHDSRKGGEMKAIQILN
DAIAWHIKNKTANEIVVKLLWESACYKLNKKHPKQAAENLEQMRRLDPKNVKVLAQLIFA
YSQFNRSKAHQISEALPSLEQMSVAVNVEKLEADGPSVLAPRFLKRQQKQQKKLLEKKQE
ENSQAKGDDKKEDLRRAKETVSEVKIDPLLVKKGKKKRKKRKLPKNMDPAVEPDPERWIP
LRERSYYKGRRKDRRKNVTKGTQGSSTMSSEYLDMSAKIQTPAQTPGSPGSSGSTPASPR
PGSVPLKQPPLNSPKPSTGARPKSKQTARGKKKKGGKGGW
Nucleotide sequence
Length: 2,685
>Harore.CG.MTP2014.S1059.g04169.01.t
ATGCAATTATATTACGAAATTGTCCTCTCCACAATCGCCAATTTCATAATATGCTATCAC
CCGAACCCCAACTTAATCCAAAATATCAACACTACCTATCCTAGATTTTTCATCCTCAAA
ACGATTGTGGATATTTACTTTGACCTGTGTCTTGTTGTAAAATCTGATTTGTTTTTGTTG
AGCTTGCGTACCTGCATTATATGCGGACGACAACTTGCTCATAATATTTGTACAGATGTC
TTGTATTTTGTCCGATGTCGCTGTTTGTATATTCCAAGTAAATATAATCGACCTATCTCA
TCCGACATCACGATCATGTCATCAACGACATCGTCGCCTCTAACTGGGATGTTTGCGGAG
TTGAACAAAACGCTTCAAGTCAATGATTACAAGCAAGCGTTGAAATTATGCAACAAAATA
ATTCATTCGAAAGAAGGAAACACAGACGAGAAAGCAATGCATTGTAAAGTTGTTTGTATG
ATAAACTTGAACCAGTTTGCAGAAGCGTTGAAGTTCATCAAATCCACGCCGGAAATCACG
TCATCTCTGATTTTTGAAAGAGCATATTCTCAATACAGACTTATCCAGACAGACGAGGCA
CTAGAGACAATCAAGGAAGCCAAGGAACTCGACGTTCGGCTGACGGAACTCAAAGCTCAA
GTTCTTTATAAGCTCGGCTATTATGACGAATCATTCGAACTTTACAAACGACTCATCAAA
GAATGTTCCGACGATTACGAAGACGAGAGAAAGTCAAATCTGATCGCCGTTCATGCGTCA
AATACTTTGTGGAAAAAGAAGCAGCAAGTCGACGTAGAACTGGAACTGACATCGTACGAA
CAAATGTACAATAAGTCCTGCAAGCTGCTTGGAGATGGTGATGCTGCAGGAGCCATTGGG
TTACTTGAAGATGCGTTGGAAAATTGCAAAGCTTATTATGAGGATGACTCTGATATGACA
GAGGAAGATATAGAAGGTGAAGTTGCTGTTATAAAGGTTCAAATGGGATATGCATTGCAA
CTACAAGGGAAGGAGGACGAAGCATTACAGCTTTATAATCAGGTTATAAAGTCGAGGCCG
GATGATATTGGACTTGTTGCAGTCGCTTCAAATAACATCATCACGATTAATAGGGAACAA
AATGTATTCGATTCGAAAAAGAAGCTGAAAGCAACGATGGTGCAAGGTCTTCGACAGAAA
CTCGTACTGAAACAGCTGATCGTGATCGATATGAACCGAGCGCTACTTTATCTCTATTCT
AACCAATGGGAAATGTGCAAAAAAGTTCTAAAATCTCTCCAGCAAGAGAACAAATCCGAT
GACGTGCCGTGCCTTATCCAAGCGGTTCAGTTATGTCGAGAGAAAAATTATGAAAAAGCG
ATTTCTTTCCTGGAGGATTTCATTGAAACGCATTCGGACCCGGACGTACATTCTATTGAC
CTTGCCAATATCAAACTCGCCCTCGTACAGATATTGCTCGGACAGGGGAAGGTGGAAAGG
GTGTGCGCCATTCTCGAAAGCATGCATGAAATCAAGTACACTCCTGGGATCATGTCGATA
TTGGTGGCGCTTCACGACTCGAGGAAAGGCGGTGAAATGAAAGCGATACAGATATTGAAT
GATGCCATCGCTTGGCATATCAAGAACAAAACTGCGAACGAAATCGTCGTCAAACTGCTG
TGGGAAAGCGCCTGCTACAAACTCAACAAAAAACATCCGAAACAAGCCGCAGAAAATTTG
GAACAAATGAGAAGGCTCGACCCTAAAAATGTCAAAGTCTTGGCGCAACTTATTTTCGCT
TATTCGCAGTTCAATCGCTCGAAAGCTCACCAGATAAGCGAGGCCTTGCCTTCGTTGGAG
CAAATGTCTGTTGCCGTTAATGTAGAGAAGTTGGAAGCGGACGGGCCCAGCGTTCTCGCA
CCAAGGTTCTTGAAACGTCAACAGAAACAGCAGAAGAAACTGCTCGAGAAGAAACAAGAG
GAAAATTCACAAGCGAAAGGAGACGACAAAAAAGAAGACCTTCGCAGAGCCAAAGAAACG
GTTTCGGAAGTTAAAATTGATCCTCTGCTCGTGAAAAAGGGAAAGAAGAAGCGAAAAAAA
CGTAAATTACCAAAAAATATGGACCCTGCTGTCGAACCCGACCCAGAACGCTGGATACCC
TTAAGAGAACGATCGTATTACAAGGGTAGAAGAAAAGATAGGAGGAAAAATGTGACAAAA
GGAACACAAGGTTCCTCCACTATGTCCAGTGAATATCTTGATATGTCTGCAAAGATACAG
ACACCGGCTCAAACCCCAGGTTCGCCAGGATCTTCTGGGTCCACACCCGCATCACCCAGA
CCCGGGTCCGTACCTCTGAAGCAGCCTCCGCTGAACTCGCCCAAACCGTCGACCGGGGCT
CGGCCAAAATCGAAACAAACTGCCAGAGGGAAAAAGAAAAAGGGGGGGAAGGGTGGCTGG
TGATAATGTTTGGAGTTTATTTAATGTCGGTGTATTTGATTTCTGGTTTTAACGGTAATT
TCTGGGCCAGAGTATTTCTGATTAAGAAAGAAAGGTTTGAAAGGAGGCTCCAGATAAAAT
TATCATAAAACTTATCTCACAAATAGTGATTCAATTTTTGTTTTATTCTCTTCTTAATCG
TGTGTTCAGTATTTCTGGAGAAATTGAAATGGAATACAGTACAAT
| PANTHER |
SRP72 (IPR026270) - T[106-817] 7.4E-189 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[114-268] 2.5E-45 - T[269-392] 2.1E-5 - T[404-625] 1.2E-11 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[123-248] 1.73E-13 - T[298-365] 2.58E-10 - T[303-363] 1.73E-13 - T[410-496] 2.58E-10 - T[531-594] 2.58E-10 |
| Pfam |
SRP_TPR-like (IPR031545) - T[134-259] 4.1E-22 |
| SMART |
TPR_repeat (IPR019734) - T[212-245] 120.0 - T[329-362] 0.046 - T[557-590] 480.0 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[212-245] 5.635 - T[329-362] 9.204 - T[557-590] 5.104 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[329-362] 10.035 |
| Pfam |
TPR_repeat (IPR019734) - T[334-361] 0.0036 |
| Pfam |
Signal_recog_part_SRP72_RNA-bd (IPR013699) - T[657-729] 3.5E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRP72_HUMAN | 40.432 % | 457 | 4.62E-151 |