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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.150.v1....' > 
  2. Transcript 'Phmamm.CG.MTP2014.S8...' > 
  3. Transcript 'Harore.CG.MTP2014.S1...' > 
  4. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1046.g02016.02.t

Possible name(s)

XPO1

Gene model

Harore.CG.MTP2014.S1046.g02016

Location

S1046 [3,068 / 8,242]

Sequences

Amino acid sequence

Length: 651

>Harore.CG.MTP2014.S1046.g02016.02.p
MISRMAKPEEVLVVENEQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYMDTERIMTEK
LHNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIRDLLGLCEQKRGKDNKAI
IASNIMYVVGQYPRFLRAHWRFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHF
VQIQAGEVMPFIEEILNNISTIICDLQPQQVHTFYEAVGYMISAQTDTNVQEHLIEKYMM
LPNQVWDSIIQQATKNVDVLKDPATVKQLGSILKTNVRACKSVGHYFVLQLGRIYLDMLN
VYKCLSENISAAIKQQGEGVMKQPLIRSMRTVKKETLKLISGWVSRSNDPDMVNENFIPP
LLEAVLMDYQSNVPAAREPEVLSTIATIVHKLEGAITQEIPQIFDAVFECTLEMINKDFE
EFPEYRTNFFLLLQAVNNHCFPALLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLNILHQ
LLQNILQEKQASQSFFQTYFTDILQHVFSVVTDTSHTAGLTMHATILAYMFSLVEQGRIV
VPLHPDASDNVAFVHEYVANLLKTAFPHLQDAQIKIFVQGLFSLNHDIPLFKDHLRDFLV
QIKEFSGQDTSDLFLEEREKSLVQAQEEKRKVQLSVPGIVNPHDLPEDMQD

Nucleotide sequence

Length: 1,956

>Harore.CG.MTP2014.S1046.g02016.02.t
ATGATCAGTCGAATGGCAAAACCAGAAGAAGTTCTTGTTGTTGAGAATGAGCAGGGAGAA
GTAGTTCGAGAATTTATGAAAGACACAGATTCAATTAATCTGTACAAAAATATGAGAGAA
ACCCTGGTTTATCTCACTCATTTGGATTACATGGACACTGAACGCATCATGACAGAAAAA
CTTCACAATCAAGTGAACGGAACAGAATGGTCATGGAAAAATTTAAATACTCTATGCTGG
GCGATCGGAAGCATCAGTGGTGCAATGCACGAAGAAGATGAGAAAAGATTTCTTGTAACT
GTGATAAGAGATCTTCTTGGACTTTGTGAACAGAAGCGAGGCAAAGATAACAAAGCGATT
ATTGCTTCAAACATCATGTATGTTGTCGGACAATATCCAAGATTTCTCAGAGCTCACTGG
AGATTCCTGAAAACAGTTGTCAATAAATTGTTTGAGTTTATGCACGAGACACACGATGGC
GTGCAAGATATGGCTTGCGACACATTCATAAAAATCGCTCAGAAATGCAGACGTCATTTT
GTGCAGATACAAGCCGGGGAGGTGATGCCGTTTATTGAGGAAATCTTGAATAACATAAGC
ACGATTATATGCGATCTACAACCACAGCAGGTTCATACATTCTATGAAGCGGTTGGATAC
ATGATCAGTGCACAAACAGATACAAATGTCCAAGAACATTTGATTGAGAAATACATGATG
TTACCGAACCAAGTATGGGATAGTATCATACAACAAGCAACGAAAAACGTCGATGTATTG
AAAGATCCAGCGACCGTCAAACAACTAGGAAGTATTTTGAAAACAAATGTGAGAGCGTGC
AAAAGTGTCGGACATTACTTTGTACTACAGCTCGGACGAATCTATCTTGATATGCTGAAC
GTTTACAAATGTTTGAGTGAGAATATCTCTGCTGCCATCAAGCAGCAAGGGGAAGGAGTA
ATGAAACAACCTTTGATACGGAGCATGAGAACAGTAAAGAAAGAAACATTAAAACTCATC
TCAGGATGGGTTAGTCGATCAAATGATCCTGATATGGTGAACGAGAATTTCATTCCACCT
CTGCTTGAAGCTGTGTTGATGGATTATCAGTCGAATGTGCCGGCAGCTCGTGAACCGGAA
GTTTTAAGTACAATAGCAACAATAGTTCATAAGTTAGAGGGAGCAATAACACAAGAAATA
CCGCAGATATTCGATGCTGTATTCGAATGTACGCTCGAAATGATCAACAAAGATTTTGAA
GAATTTCCAGAATACAGAACAAATTTCTTTTTATTATTACAAGCTGTCAACAATCACTGC
TTCCCTGCTCTTCTTGCTATTCCTCCTGCACAATTCAAACTTGTTCTTGATTCAATCATT
TGGGCTTTCAAGCATACAATGAGGAATGTCGCTGATACAGGTTTGAATATTCTTCATCAA
CTATTGCAGAACATTTTGCAAGAAAAGCAAGCGTCGCAAAGTTTCTTTCAAACTTACTTC
ACAGATATATTACAGCATGTGTTTAGCGTTGTTACAGATACTTCACATACTGCTGGTCTC
ACAATGCATGCAACCATCCTTGCATACATGTTCAGTTTGGTTGAACAAGGTCGTATCGTG
GTTCCACTGCATCCAGATGCCTCTGACAACGTAGCATTCGTTCATGAATATGTTGCAAAT
TTATTAAAGACCGCTTTCCCACATCTTCAAGACGCTCAGATCAAGATCTTTGTTCAAGGT
TTATTCAGTTTAAATCACGACATCCCGCTCTTCAAAGATCATCTTAGAGATTTCCTCGTA
CAAATTAAGGAATTTTCTGGTCAAGACACTTCAGATTTATTTTTGGAAGAACGTGAAAAA
TCTTTGGTTCAAGCTCAAGAAGAGAAACGTAAAGTTCAGCTCTCTGTACCTGGCATTGTA
AACCCACATGACTTACCAGAGGATATGCAAGATTAA

InterProScan

Gene3D
ARM-like (IPR011989) - T[1-635] 0.0
SUPERFAMILY
ARM-type_fold (IPR016024) - T[288-607] 8.86E-121
Pfam
CRM1_C_dom (IPR014877) - T[290-607] 8.5E-133
SMART
CRM1_C_dom (IPR014877) - T[290-607] 1.5E-205

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
XPO1_HUMAN 85.89 % 1184 0