- Clone 'cijv031c09' >
- Transcript 'Moocul.CG.ELv1_2.S60...' >
- Transcript 'Moocci.CG.ELv1_2.S64...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S102.g05611.01.t
Possible name(s)
OPN1LW; OPN1MW2; OPN1MW3
Gene model
Location
S102 [153,639 / 157,073]
Amino acid sequence
Length: 473
>Harore.CG.MTP2014.S102.g05611.01.p
MNNLLNDISTGKFDDYFYNDTEGIEEDNSTYSNESAAPAEWDPWHPPYAIRANRTYYSLV
AIYMSFLFFFAFILNVLVLYTAYKNRILRTPLNYIILNLTVADLLSVIFSCFVGIATNAS
GRFFFGKWMCQAEGYLASVSGITGLVSIAVMAFERYFVICKPFGPVRFAENHAILGILFS
WLYSLAWNSPPLIFWDGYEAEGLGTTCAPNYFVTDPGQRLFIVLYFVFCFIIPFSAIFLS
YGKLIMTLRQMAKESTVSSSSNVSADQEVTKMVVMMVAAFTFCWVPYSVVSMMTVFSDNK
NYALGAIPAFFAKSASIYNPLIYIGLNRQFRDCTIKALFNGKNPWSDDIGATSSMMSTTS
ATTTISTNKHCKLDISRIELAYFCSKIVQGIKRFFGKSYDNAIRLTLQMHYYLYHLYKAV
VSCYPVFHSCYIFYIANQLLLATNLLLICHREYELFTGNCIPHTMRFDTNHHL
Nucleotide sequence
Length: 2,349
>Harore.CG.MTP2014.S102.g05611.01.t
CTGACGTAATTCCATTTTCGGAGTTCCTACTTCATCAAATTTTACAGAAATCATCCGTCG
TAATATAAATAATATAAACATGTGATATACAACACAAGAGCACATAGGAAAGTTAATTAT
CCTTACGAATTGCAGGATTACATTTTATCTGCACTCAGATGACGAATATCTTCTCATCCG
TTACTCCGTTTTTTTTATATGACATGGTAATAATAAATATAATCGTCGCTTTCATTAGCG
AAAAGACGATAAATCAAGGAAATAATTCCCAAATATATCTCCCAAGAGCACATTTCGACA
TATGTCGATGCGATTTCAAACGCTCAATATAGTACAGGACGTTTCGACGAATTAAATAAC
CGATTACATTGTCGGGGAGATAAAATCATTCACTTAATTTCGCCAGGTTGTCATTCTATG
CATGACCGTCAAATGATTGATAATCCTGTGACATATTGTTCAATCAGAATATGACAAAAA
ATCCTTCAATAAATGCTTGGAAATCAGGATTGTACACCTTCATTCCGTTCGCTAACTCGT
AGGTGAAGGACGAAGAAGTACTAACCAGTTGGTCTACAATAGTATTAAGCAGGAAGTTAC
TATGCTGCAAAATATTGATACTGTGTATGAGTTCATATCTACAATTGCTATTGATAATGC
ATATTCACAAGAAACTTCATTATAGATAGATTGCCTAATTAAAGTAGAAAAATTTGAATT
CTAGAATTTGTGCAATCGACCCAACATTGTTTTTAGATGAACCTGCCTATAACGTTGAAT
AAATAGTGTGAATTGTGTCTCCGTGAACCATGAACAACTTACTGAACGACATATCGACTG
GAAAATTTGACGACTATTTTTACAATGATACCGAAGGAATAGAAGAAGACAACAGCACGT
ATTCAAACGAATCTGCTGCGCCTGCCGAATGGGATCCGTGGCACCCGCCTTACGCGATCC
GTGCAAATCGCACCTATTATTCTCTCGTGGCAATCTACATGTCGTTCTTATTTTTCTTCG
CGTTTATTCTCAACGTGCTCGTGCTCTATACTGCATACAAAAATCGGATTCTTCGAACTC
CGTTGAACTACATCATTTTGAATCTGACTGTGGCCGATTTGCTCTCCGTTATTTTCAGTT
GCTTCGTTGGGATTGCGACTAACGCTTCCGGTCGCTTCTTCTTCGGCAAATGGATGTGCC
AGGCCGAAGGTTATCTGGCTTCAGTTTCCGGTATCACTGGCTTGGTATCGATTGCTGTGA
TGGCGTTCGAACGATACTTCGTAATCTGCAAGCCATTTGGACCCGTACGATTTGCGGAGA
ATCATGCTATATTGGGCATCTTATTTTCTTGGTTATATTCCCTCGCCTGGAATTCACCAC
CGCTGATATTCTGGGACGGTTACGAAGCTGAAGGTTTGGGAACTACTTGTGCTCCCAACT
ACTTCGTAACCGATCCGGGACAACGACTCTTCATTGTTTTGTACTTCGTCTTTTGCTTCA
TCATCCCTTTCTCTGCCATTTTTCTGTCGTATGGAAAACTGATTATGACGCTTCGACAGA
TGGCTAAAGAGTCGACGGTGTCGAGCTCCAGCAACGTAAGCGCCGATCAGGAAGTTACGA
AAATGGTGGTAATGATGGTGGCGGCTTTCACTTTCTGTTGGGTTCCATACTCCGTAGTTT
CGATGATGACCGTGTTTAGTGACAACAAAAATTACGCTCTCGGTGCCATTCCAGCTTTCT
TTGCCAAGTCCGCTTCCATTTACAACCCTCTTATCTACATAGGACTAAACAGACAATTCC
GTGACTGCACAATCAAAGCACTCTTCAACGGAAAGAATCCTTGGAGCGACGATATAGGTG
CTACCAGCTCTATGATGTCCACCACCTCAGCAACGACCACAATAAGCACAAACAAACATT
GCAAACTTGATATAAGTAGAATTGAATTAGCCTATTTTTGTTCCAAAATCGTCCAGGGAA
TTAAAAGATTCTTTGGCAAATCATACGATAATGCTATAAGGCTAACGCTTCAAATGCATT
ACTACCTATACCACCTATACAAGGCTGTTGTTTCGTGTTATCCAGTATTTCATTCTTGTT
ATATCTTTTACATTGCTAACCAATTATTATTGGCTACAAACCTGTTATTAATTTGTCATA
GGGAGTACGAACTATTTACTGGTAATTGTATTCCACATACGATGCGATTTGATACGAATC
ATCATTTGTGAATTGTTGCAGAAACATAAAAAGACGACAACTAATAAAATTATTTGGAAA
ATCATAACTACTTTATGTAAGTCAGATTTAAAGGTTGTAACGAGAGACGACAACTAATAA
AATTATTTG
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[59-83] 6.5E-35 - T[92-113] 6.5E-35 - T[137-159] 6.5E-35 - T[172-193] 6.5E-35 - T[222-245] 6.5E-35 - T[269-293] 6.5E-35 - T[305-331] 6.5E-35 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[74-323] 38.787 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[75-323] 1.8E-43 |
| ProSitePatterns |
GPCR_Rhodpsn (IPR000276) - T[143-159] . |
| ProSitePatterns |
Retinal_BS (IPR027430) - T[307-323] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OPSR_HUMAN | 39.831 % | 244 | 6.23E-77 |
| OPSG3_HUMAN | 39.831 % | 243 | 2.3E-76 |
| OPSG_HUMAN | 39.831 % | 243 | 2.3E-76 |