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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Transcript 'Cisavi.CG.ENS81.R7.1...' > 
  3. Transcript 'KH2012:KH.C11.177.v1...' > 
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g47925.01.t

Possible name(s)

NPM1; NPM3

Gene model

Boschl.CG.Botznik2013.chrUn.g47925

Location

chrUn [298,004,156 / 298,009,724]

Sequences

Amino acid sequence

Length: 163

>Boschl.CG.Botznik2013.chrUn.g47925.01.p
AVLGPGAKNNERNIVEVTTFDSEQAKIKTCICALGIGKSENQALADVALYPPAHFTLVEG
SGPVHIVANHTVLDEDDFSDDDDMSDYEEEMADVSPKKINGKGDAPKQIKAKAKAAKEDE
DLDDDSELDDEDLVSDPLEGKSDLDLVLPEAVICPLQHPERGS

Nucleotide sequence

Length: 492

>Boschl.CG.Botznik2013.chrUn.g47925.01.t
CTGTCCTCGGTCCGGGAGCGAAAAATAACGAGAGAAACATCGTCGAAGTAACGACCTTTG
ACAGCGAACAAGCCAAGATCAAGACGTGTATCTGTGCGCTGGGGATCGGAAAGTCGGAAA
ATCAAGCCCTGGCCGATGTCGCGCTTTACCCGCCCGCCCACTTTACTTTGGTGGAAGGTT
CCGGCCCAGTTCACATCGTTGCGAATCACACGGTTTTAGGTGAAGACGATTTCTCGGACG
ACGATGATATGTCTGACTACGAGGAGGAAATGGCAGACGTGAGCCCTAAGAAAATCAACG
GAAAGGGAGACGCACCCAAACAGATAAAGGCCAAGGCAAAGGCTGCTAAAGAGGATGAGG
ACCTCGATGAGGACTCTGAGCTCGACGACGAGGATTTAGTCTCGGATCCGCTGGAAGGGA
AATCAGACCTGGATTTGGTCCTGCCGGAAGCGGTAATATGTCCTTTACAACACCCTGAGC
GGGGTAGTTGAC

InterProScan

Pfam
Nucleoplasmin_core_dom (IPR024057) - T[1-72] 2.6E-17
PANTHER
Nucleoplasmin (IPR004301) - T[1-133] 3.5E-28
SUPERFAMILY
Nucleoplasmin_core_dom_sf (IPR036824) - T[2-72] 1.96E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value