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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g46779.01.t
Possible name(s)
ACTN2; ACTN4
Gene model
Location
chrUn [291,143,742 / 291,160,103]
Amino acid sequence
Length: 673
>Boschl.CG.Botznik2013.chrUn.g46779.01.p
MLDPEDIVNMAKPDERSIMTYVSAFYHAFSGNDQTETAANRICKVLNVNQENERLMDEYE
RLASDLLEWINRMRPWLENRSTDNTMDAVQSKLDDFRDYRRRQKPPKAEEKGQLESAFNT
LQTKLRLNNRPAFMPSEGKLVSDIANAWKGLEGAEKGYEEWLLSEMRRLERLDHLAKKFY
HKAQIHESWTAGKEKKLAEQDYMHCQLQEVKALIKKHDAFETDLAAHQDRVEQIAAIAQE
LNDLDYHDTATINSRCTSICEEWDRLGDATGKRREALLNVEKCMEAIEQLHLEFAKRAAP
FNIWMDGAMEDLEDMFIVHSNEEIKGLISAHETFKATLSDAEQEKNIIMSLMNDVEKHRR
MYNLTQEMENVYTNLTPEKIDDKWRRVKELVPKRDQSLQQELAKQMNHERLRVEFATLAN
KVGPWITEKTEETVRMALNIKGSLENNLSNLKTYQQNIIAYQPNVDNLETINQKVQESLV
YDNPHTPFTMEHIRVGWEHLKTSLARTINEIENQILLRDAKGITEEQMNEFRSSFNHFDR
DGNGWLYPDQFRGCLINIGMDVTPDSSQGEAEFQRIMAIVDPNASGMVTFQSFIDFMTHE
NIDSDTADQVINSFRILAGDKPYITADELRRELPPDQAEYCIQRMSPWRGPDAPADALDY
ESFSTALYGESDL
Nucleotide sequence
Length: 2,022
>Boschl.CG.Botznik2013.chrUn.g46779.01.t
AATGTTGGACCCAGAAGACATTGTCAACATGGCTAAGCCCGATGAACGGTCTATCATGAC
CTACGTCTCTGCTTTCTATCACGCGTTCTCTGGCAATGATCAGACCGAGACGGCCGCCAA
CCGCATCTGCAAAGTGCTGAACGTCAACCAGGAAAATGAGAGGCTCATGGATGAATATGA
AAGGCTCGCTTCCGAGCTGTTGGAGTGGATCAACCGCATGCGGCCATGGCTCGAAAACAG
ATCCACTGACAACACAATGGACGCTGTTCAGAGCAAGCTCGACGATTTCCGAGACTACAG
GAGGCGCCAAAAGCCTCCGAAGGCCGAGGAAAAGGGACAGCTCGAGTCTGCGTTCAACAC
GCTTCAGACTAAGTTGCGTCTGAACAACCGACCGGCGTTTATGCCGTCTGAAGGGAAGTT
GGTGTCTGACATCGCCAACGCTTGGAAGGGTCTGGAAGGCGCGGAGAAAGGCTACGAGGA
ATGGCTTCTCTCGGAAATGAGAAGATTGGAGCGTTTGGACCATTTGGCAAAGAAGTTTTA
CCACAAGGCCCAAATTCACGAGTCGTGGACCGCCGGTAAGGAAAAGAAGCTGGCCGAACA
AGACTACATGCACTGCCAATTGCAAGAAGTCAAGGCATTGATCAAGAAGCACGACGCTTT
CGAGACCGACCTTGCCGCCCATCAAGATCGTGTGGAACAAATCGCTGCCATCGCCCAAGA
ATTGAGCGATCTGGACTATCACGACACGGCAACCATCAACAGCCGTTGCACTTCGATATG
CGAGGAATGGGACAGACTGGGAGATGCTACTGGAAAGAGGAGAGAAGCTCTTTTGAACGT
TGAGAAATGTATGGAGGCCATCGAACAGCTGCATCTTGAATTTGCCAAAAGGGCGGCGCC
TTTCAATATCTGGATGGACGGCGCAATGGAAGATTTGGAAGACATGTTCATCGTTCACTC
GAACGAAGAAATCAAGGGTCTGATCAGCGCTCACGAGACGTTCAAAGCCACGCTCAGCGA
CGCGGAGCAAGAGAAGAACATCATCATGTCGCTGATGAACGACGTCGAGAAGCACAGACG
CATGTACAACCTCACCCAGGAGATGGAGAACGTCTACACCAATCTGACCCCGGAGAAGAT
CGACGACAAGTGGCGCAGGGTGAAGGAACTGGTACCAAAACGCGACCAGTCCTTGCAGCA
GGAGCTCGCCAAGCAGATGAACCACGAGCGTTTGCGCGTGGAGTTTGCGACACTTGCCAA
CAAAGTCGGGCCCTGGATCACGGAGAAAACCGAGGAAACCGTCCGCATGGCTCTCAACAT
CAAGGGATCGCTAGAGAACAACCTGTCTAACTTGAAGACTTATCAACAGAACATTATCGC
CTACCAGCCCAACGTGGATAACCTCGAAACCATCAACCAGAAAGTGCAAGAGAGCCTCGT
GTACGACAACCCGCACACGCCCTTCACCATGGAGCATATCCGCGTCGGCTGGGAGCATCT
GAAAACGTCCCTGGCCAGAACGATCAACGAGATTGAGAACCAGATTCTGCTTCGCGACGC
CAAGGGCATCACGGAGGAACAAATGAATGAGTTCAGAAGCTCGTTCAACCACTTCGACCG
GGACGGAAATGGCTGGCTTTACCCTGATCAGTTCCGTGGATGCCTTATCAATATCGGAAT
GGATGTCACCCCCGATTCGAGCCAGGGAGAGGCCGAGTTCCAGCGTATCATGGCAATCGT
GGATCCTAACGCGAGCGGAATGGTCACCTTCCAAAGCTTCATCGATTTCATGACACACGA
GAACATCGACAGCGACACCGCCGATCAAGTGATCAACTCCTTCCGCATTTTGGCTGGAGA
TAAGCCGTACATTACTGCCGACGAACTGCGCCGGGAGCTTCCCCCAGACCAGGCGGAATA
CTGCATCCAAAGAATGTCGCCGTGGCGCGGACCCGATGCGCCCGCCGACGCTTTGGACTA
CGAGAGCTTCTCCACGGCTCTCTACGGAGAGTCCGACCTCTA
| Gene3D |
CH_dom_sf (IPR036872) - T[1-39] 1.4E-9 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[1-29] 1.21E-5 |
| PANTHER |
Alpha-actinin_1 (IPR026921) - T[1-673] 0.0 |
| Pfam |
Spectrin_repeat (IPR002017) - T[55-163] 6.4E-13 - T[175-278] 1.3E-22 - T[290-400] 1.2E-11 - T[412-512] 1.2E-12 |
| SMART |
Spectrin/alpha-actinin (IPR018159) - T[57-163] 1.2 - T[177-278] 3.7E-21 - T[292-399] 0.018 - T[413-512] 5.9 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[512-667] 1.05E-20 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[526-561] 10.552 - T[568-603] 10.496 |
| SMART |
EF_hand_dom (IPR002048) - T[530-558] 3.2 - T[572-600] 0.012 |
| CDD |
EF_hand_dom (IPR002048) - T[530-598] 3.07602E-11 |
| Pfam |
EF-hand_Ca_insen (IPR014837) - T[603-669] 1.2E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTN2_HUMAN | 66.122 % | 929 | 0 |
| ACTN1_HUMAN | 65.23 % | 928 | 0 |
| ACTN4_HUMAN | 64.636 % | 919 | 0 |