Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g43714.01.t

Possible name(s)

GCLC

Gene model

Boschl.CG.Botznik2013.chrUn.g43714

Location

chrUn [282,349,720 / 282,364,313]

Sequences

Amino acid sequence

Length: 517

>Boschl.CG.Botznik2013.chrUn.g43714.01.p
GYSSCLKANSVLFRRKEVEEHLTANERIASLTVFPRLGCKSCTIPEHTITGPESNPVSRS
LFFPDEAITSHPRFSLLTKNIRERRGKKVAINVPVFKDVNTPSPFREVYADPEANAAAKP
DHIYMDCMGFGMGNSCLQLTFQACNIDEARCLYDELAPVCPIMLALSAASPIFRGHLADI
DVRWNVIAASVDDRTDEEMGKVPLKNNSYLSAGHDLCNDVNLEVHEPIKKRLQDAGIDEL
LSQHIAHLFIRDPMTLFSKKIDLDDTTQSDHFENIQSTNWQSMRFKPPPPKSSIGWRVEF
RVCEAQLSDYENAAFVVFIVLLTRVILTYKLMFTMPISKVDENMQEAHKNDALRKSTFWF
RRNVQTTDSPQCCSSLCDSASADGDTPNECFKKMSIDTIINGKADEFVGFIPLIRLYLSS
VDVDVHTRCSIAEYLKLISKRASGEYLTTAQWMREFVQAHPDYKKDSAVSDTVTYDLLWR
CCQIASGEVEEERLFQKPKNKSTYSMPPGTKRHNPQC

Nucleotide sequence

Length: 1,556

>Boschl.CG.Botznik2013.chrUn.g43714.01.t
TGGATACAGCTCATGCCTTAAAGCTAACTCTGTGTTATTTAGGAGAAAAGAAGTGGAGGA
ACATCTCACTGCAAATGAAAGAATTGCCAGCTTAACTGTCTTTCCGAGGTTGGGCTGCAA
ATCTTGTACCATTCCCGAACATACGATCACGGGTCCAGAGAGCAATCCGGTTTCGAGGTC
ATTGTTTTTTCCGGACGAAGCTATCACAAGTCACCCGAGATTTTCGCTGCTGACAAAAAA
CATTCGAGAGCGACGAGGCAAGAAAGTTGCTATCAATGTACCTGGATTCAAGGATGTAAA
CACCCCGTCTCCGTTTCGCGAAGTGTACGCCGATCCCGAGGCCAATGCAGCGGCAAAGCC
CGATCATATCTACATGGATTGCATGGGTTTCGGGATGGGGAACTCGTGTCTCCAACTCAC
GTTTCAAGCGTGCAATATAGACGAAGCCCGGTGCCTTTACGACGAACTGGCTCCAGTTTG
TCCCATTATGGTCGCGTTAAGCGCAGCGTCTCCGATTTTCCGTGGGCACCTCGCAGACAT
CGACGTCAGATGGAACGTGATAGCGGCCAGCGTGGACGACCGCACCGACGAGGAGATGGG
CAAGGTCCCGCTCAAAAACAACAGGTATCTGTCCGCGGGACACGACTTGTGCAATGACGT
CAACTTGGAGGTGCACGAACCGATTAAAAAAAGACTGCAGGACGCAGGCATAGACGAATT
GCTATCGCAGCACATCGCCCACCTTTTCATCCGCGACCCGATGACTCTTTTTTCGAAAAA
AATCGATTTGGACGACACCACCCAGTCCGACCATTTCGAGGACATTCAGTCCACCAATTG
GCAGTCGATGCGTTTCAAGCCGCCGCCTCCAAAGTCTTCCATCGGTTGGCGAGTCGAGTT
TCGTGTGTGCGAGGCTCAGCTGAGCGACTACGAGAACGCCGCTTTTGTCGTGTTCATTGT
TCTACTCACGAGAGTTATCCTCACCTACAAACTCATGTTCACAATGCCAATTTCAAAGGT
TGACGAAAATATGCAAGAAGCTCACAAAAACGACGCTCTGCGAAAGAGCACGTTTTGGTT
CCGACGCAACGTACAGACAACCGATTCGCCGCAGTGCTGCTCGTCGCTGTGCGACAGTGC
GAGCGCGGATGGCGACACGCCGAACGAATGCTTCAAAAAGATGTCCATCGATACGATCAT
CAACGGGAAGGCTGATGAATTCGTCGGCTTCATACCACTGATCCGCCTTTACCTGAGCAG
CGTTGACGTTGACGTCCACACCAGGTGCAGCATTGCCGAATACTTGAAGCTCATCAGCAA
AAGGGCATCAGGCGAATACCTCACAACGGCGCAATGGATGAGAGAGTTCGTCCAGGCGCA
CCCCGACTACAAGAAGGACTCGGCAGTGTCGGACACTGTGACGTACGATCTCCTGTGGCG
GTGTTGCCAGATCGCGTCCGGCGAGGTGGAGGAGGAGCGGCTCTTCCAAAAACCAAAGAA
CAAAAGCACTTATTCCATGCCTCCCGGCACGAAGCGCCACAACCCGCAATGCTGAG

InterProScan

PANTHER	GCS (IPR004308) - T[9-502] 2.2E-208
SUPERFAMILY	Gln_synth/guanido_kin_cat_dom (IPR014746) - T[12-90] 5.89E-39 - T[135-228] 5.89E-39 - T[279-360] 5.89E-39 - T[388-469] 5.89E-39
Pfam	GCS (IPR004308) - T[123-484] 5.3E-158

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
GSH1_HUMAN	57.115 %	583	0