Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g41157.01.t

Possible name(s)

BDP1

Gene model

Boschl.CG.Botznik2013.chrUn.g41157

Location

chrUn [270,153,982 / 270,155,788]

Sequences

Amino acid sequence

Length: 601

>Boschl.CG.Botznik2013.chrUn.g41157.01.p
MIRRAKIKARPVLRKAQGSAPKPASQPSKPQSETTATPDTIKKVAENTNSDEVATAESGL
EVLTSGTKANIVEPPSEEIATANSGDEAQTSKTEADIIEPPREDTSKTEAIPTQSNSPQS
TKVEMDNTKDLDSSQENPGPKTIITVRRRKLTACPTIGKNRRKPNPTKSATSSNTEEKNS
VPSTSDAIIEVSALPTPADDSKSSEKKELCVNKTAVPGGRRRKVTACPTINAKRRKIDTH
SEIAKPIVPTTADTSESVDTSPNLSVSESPSAAVDAITLPTQEIGASEEVISDVAAVTTI
DETRSDRTILDSPVYGIKSNDVSITTITTVTTLPDNDNKKQGVSQHQQQKIILPKKAALV
KVKTKSLSSNYRSKAMEKLNRLRKNQADSGAWPKWDQNFVSMSDLIFLNPPAESGQRLGM
NANRDIPVVESVETPASSNQEVETQDETGEDAPMPVPQIRIAEDGSVVVDEESLVLDTQK
PQNPEITTVYETGRDNMINQRSFVRRAPARGMRWSVDETNKFYKCLCVVGAEFSLMSAMF
RGRTPDDLRRKFKREHKSNPDRVDLALMQQHLSKWTDDMFVSGDTGDAGVMKPAPETVSQ
S

Nucleotide sequence

Length: 1,806

>Boschl.CG.Botznik2013.chrUn.g41157.01.t
TGATTCGTAGAGCTAAGATCAAGGCCCGTCCTGTTTTACGGAAGGCACAGGGGTCCGCGC
CGAAACCGGCATCTCAGCCGTCGAAACCGCAATCTGAGACCACCGCAACACCAGACACTA
TCAAGAAAGTGGCCGAAAACACGAATAGTGATGAAGTTGCTACTGCGGAATCAGGTCTTG
AAGTCCTAACTTCTGGAACTAAGGCGAATATCGTTGAGCCACCTAGCGAAGAAATTGCTA
CCGCGAATTCAGGTGATGAAGCACAAACTTCTAAAACTGAGGCAGATATCATTGAGCCGC
CTCGAGAAGATACTTCCAAAACTGAAGCAATACCAACACAATCCAACTCGCCGCAAAGCA
CCAAAGTCGAAATGGATAATACTAAGGATTTAGACTCGAGTCAAGAAAATCCTGGTCCTA
AAACGATAATAACGGTTCGTCGGCGGAAATTAACAGCTTGTCCGACGATTGGTAAAAACC
GGCGCAAACCAAATCCAACTAAATCTGCCACTTCTTCAAATACCGAGGAAAAAAACTCGG
TGCCCAGTACTTCAGACGCTATCATTGAAGTGTCTGCCCTTCCGACGCCTGCAGACGATT
CAAAAAGCTCAGAGAAAAAGGAGTTATGTGTCAATAAAACCGCAGTTCCGGGAGGTAGAA
GACGCAAGGTAACTGCTTGTCCCACTATTAACGCAAAGCGTCGAAAAATAGACACGCATT
CCGAAATCGCCAAACCTATTGTTCCTACAACTGCAGATACAAGCGAATCTGTCGATACAT
CCCCAAATCTGAGCGTGTCTGAGAGTCCATCAGCGGCAGTCGACGCTATTACCTTACCTA
CACAAGAAATAGGTGCTTCAGAAGAGGTGATATCAGATGTAGCTGCTGTGACTACGATCG
ACGAGACACGGTCAGACCGGACCATCCTCGATTCGCCAGTTTACGGAATAAAGTCAAACG
ATGTCAGCATAACTACGATCACAACAGTTACTACATTACCGGATAACGATAACAAGAAAC
AGGGCGTGTCGCAGCACCAACAACAAAAAATCATACTGCCTAAAAAGGCAGCATTGGTAA
AAGTGAAGACAAAGTCTCTTTCTAGTAATTACAGGAGTAAAGCGATGGAGAAACTGAATC
GTTTGCGGAAAAACCAAGCCGACTCGGGCGCGTGGCCGAAGTGGGACCAAAATTTCGTGT
CTATGTCGGACTTAATTTTTTTGAATCCTCCAGCCGAATCGGGGCAGAGGCTCGGGATGA
ACGCGAATCGCGACATCCCCGTCGTAGAGTCTGTGGAAACACCGGCGTCGTCAAACCAAG
AGGTAGAGACTCAGGATGAAACGGGGGAGGACGCGCCAATGCCTGTGCCGCAAATTCGTA
TCGCCGAGGACGGGTCAGTGGTTGTTGACGAAGAGAGCCTCGTGTTGGACACGCAAAAGC
CACAAAACCCGGAGATAACCACCGTGTATGAAACCGGTCGGGACAACATGATAAATCAAC
GCAGTTTTGTACGTCGGGCACCGGCCCGGGGCATGCGTTGGTCTGTGGACGAGACTAATA
AGTTTTATAAGTGTCTCTGCGTGGTGGGCGCCGAGTTTAGTTTGATGAGCGCGATGTTTC
GAGGACGCACTCCGGACGATCTTCGGAGGAAGTTCAAGCGCGAACATAAGAGCAACCCGG
ACAGGGTGGACTTGGCTCTGATGCAGCAGCATCTCAGCAAGTGGACTGATGATATGTTTG
TGTCCGGTGATACCGGTGACGCGGGTGTTATGAAGCCTGCCCCTGAGACGGTCTCGCAAT
CATGAA

InterProScan

PANTHER	TFIIIB_B'' (IPR030701) - T[1-570] 3.8E-35
SMART	SANT/Myb (IPR001005) - T[510-558] 0.0038
CDD	SANT/Myb (IPR001005) - T[513-554] 0.00510134
SUPERFAMILY	Homeobox-like_sf (IPR009057) - T[513-559] 5.88E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
BDP1_HUMAN	27.426 %	86.3	2.56E-17