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TRANSCRIPT CARD

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  1. Molecular Tool 'cicl16e24-MO (Hamada's MO)' > 
  2. Region 'REG00000067' > 
  3. Molecular Tool 'Pax3/7-MO (Imai 2009)' > 
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g41041.01.t

Possible name(s)

RPS19

Gene model

Boschl.CG.Botznik2013.chrUn.g41041

Location

chrUn [269,528,862 / 269,534,823]

Sequences

Amino acid sequence

Length: 186

>Boschl.CG.Botznik2013.chrUn.g41041.01.p
MVRSTHVTNSVDIAICHHCFRCTRLISDMPPQKQQTMEIAQMGGGVTVKDVDQQEFVKQL
AAFLKKSGKMKNPEWADLVKTAVRKELSPNDPDWFYVRCASTARHLYLRGGVGVKSFTKI
YGGRKRRGTKPSHFSRGSQSIARRALQALEGVKMIQKDEMGGRRITYQGQRDMDRIAGKV
AAAKSS

Nucleotide sequence

Length: 561

>Boschl.CG.Botznik2013.chrUn.g41041.01.t
AATGGTTAGATCAACGCATGTGACGAATTCTGTCGACATCGCTATTTGTCACCACTGCTT
TCGTTGCACTCGTCTGATATCAGATATGCCGCCGCAAAAACAACAGACAATGGAAATAGC
CCAGATGGGGGGTGGAGTTACTGTGAAGGATGTTGATCAGCAAGAGTTTGTCAAGCAGTT
GGCAGCATTTTTGAAGAGATCTGGCAAGATGAAGAACCCAGAGTGGGCAGATCTTGTGAA
GACAGCAGTCCGAAAAGAATTGAGTCCAAATGATCCAGATTGGTTCTACGTCAGATGCGC
ATCTACTGCTCGACATCTGTACCTTCGTGGTGGCGTCGGTGTCAAATCTTTCACCAAGAT
ATATGGAGGACGAAAACGCCGAGGAACCAAGCCCTCGCATTTCAGCAGAGGTTCACAATC
GATTGCGCGCAGGGCTCTCCAAGCTCTTGAGGGAGTTAAAATGATCCAAAAAGACGAAAT
GGGTGGACGAAGAATCACATACCAAGGTCAACGGGATATGGATCGAATTGCTGGCAAAGT
GGCTGCTGCCAAGTCTAGTTA

InterProScan

Gene3D
Ribosomal_S19e_sf (IPR038111) - T[26-185] 4.3E-62
PANTHER
Ribosomal_S19e (IPR001266) - T[45-183] 3.9E-52
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[46-182] 5.53E-57
ProDom
Ribosomal_S19e (IPR001266) - T[47-161] 1.0E-45
SMART
Ribosomal_S19e (IPR001266) - T[47-183] 3.5E-85
Pfam
Ribosomal_S19e (IPR001266) - T[47-181] 2.5E-58
ProSitePatterns
Ribosomal_S19e_CS (IPR018277) - T[131-150] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS19_HUMAN 74.101 % 218 9.9E-74