- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g39904.01.t
Possible name(s)
TMTC1; TMTC3; TMTC4
Gene model
Location
chrUn [263,059,315 / 263,061,583]
Amino acid sequence
Length: 755
>Boschl.CG.Botznik2013.chrUn.g39904.01.p
MFISDKLTPLELISFRRTSNVVTGLRVCILAFAACLIILCRIALMDSDIPVFSLFDNPAS
FSPTPSRQLTFNFLLAQNLWLLLCPSSLLCDWTFGTVPIVSDICDFRNFATLVFYIFLLT
LTYYAASKRNAASKVLIMGLAFLVFPFLPASNLLFSVGFVIAERVLYAPSMGYCLIVAIG
LSKLAAKYRRLKKPFWALFVFVLFCFSLKTVGRNAEWMSNYTLFQSGLKVTRQNPKIWNN
IGHTLEHDHPEKALAYYTVAARIQPNDIGSLINVGRIKKRLGFFDEAEIAYRKALNLFPK
REKEGKIVARVAPEHLQVFVHLGNLVKRNESRLSEVDDLYKQALRYRRDFTDAHINRGEI
LILMGKLKEAIECYETALLYSKDKADVHFNLAVVHSQIGNLSGAIEHYTYAIQANPNHIR
ALYNSAVIFEETGDKDLVRRAKVRVKRVLELEPDNHLALSLMGSIHLDEGNEKLAVSNWG
KVLRIHPGDKSALYNMAQMYSKKADATSEAIETIETLLDHHPNYVKGLMLYGDMLLNQRK
DYKAASDAFKKIIDADPSHVQARHNYCVVILQEGKLTEAEQCMEKVLSMAPDASFVINNL
AIIRKHIAKRSAQSQNAVKFTSEDGGNTAEKLEVKSASRQEDDEAVFVEPARKKPAFSKR
AAAILEDTKSTVANLENRNSQDRLQDIEKALRKVKSSVKKLTSMSEQVSNVMDEKCPSKK
IDVKDSGKDAPRPDRVDGLRRKALKALEDLEASLD
Nucleotide sequence
Length: 2,268
>Boschl.CG.Botznik2013.chrUn.g39904.01.t
CATGTTTATATCAGATAAATTGACTCCTCTCGAACTCATATCATTTCGTAGGACCAGTAA
TGTGGTTACCGGACTGCGCGTTTGCATATTGGCATTTGCTGCTTGTTTGATCATACTATG
TAGAATTGCGCTTATGGACAGCGACATACCTGTTTTTTCGTTGTTTGATAATCCAGCTTC
GTTCAGTCCTACCCCTTCCAGGCAATTGACCTTTAATTTCCTGTTGGCGCAGAACTTATG
GCTTTTGCTATGTCCAAGTTCTTTACTTTGCGACTGGACTTTCGGCACCGTACCGATTGT
GTCGGATATTTGTGATTTTCGAAATTTTGCTACTCTCGTGTTCTATATTTTTCTTTTGAC
GTTGACGTATTATGCTGCTAGTAAACGAAACGCCGCTAGTAAAGTTTTGATCATGGGTCT
CGCATTTTTAGTGTTCCCGTTTCTCCCTGCCAGTAATTTGTTGTTTTCAGTGGGGTTTGT
GATTGCGGAACGAGTGTTGTATGCTCCGTCAATGGGCTATTGTTTAATTGTCGCCATCGG
TCTGTCAAAATTGGCGGCGAAGTATCGGCGTCTGAAAAAGCCCTTTTGGGCTTTGTTCGT
TTTCGTACTGTTTTGTTTCTCGTTAAAAACTGTCGGCAGAAATGCAGAGTGGATGTCCAA
TTATACTCTCTTTCAAAGCGGTCTGAAAGTCACAAGACAAAATCCAAAAATATGGAACAA
CATAGGGCACACATTGGAGCATGATCACCCTGAAAAGGCTCTCGCCTATTACACAGTAGC
AGCACGAATTCAACCCAACGATATCGGCTCTCTAATCAATGTTGGAAGGATTAAAAAAAG
GCTTGGATTTTTCGATGAAGCCGAAATCGCTTACAGAAAAGCTCTGAATCTCTTTCCTAA
ACGCGAAAAAGAAGGCAAAATCGTTGCACGAGTAGCGCCAGAGCATCTTCAAGTGTTTGT
GCATCTCGGAAACTTGGTAAAACGGAATGAATCGCGCTTGAGTGAAGTCGATGACTTGTA
CAAACAAGCCTTGAGGTATCGGCGGGATTTCACAGACGCTCACATAAACAGAGGCGAGAT
ATTAATTTTAATGGGAAAGTTGAAGGAAGCTATCGAGTGCTACGAAACGGCACTATTGTA
TTCTAAAGATAAAGCCGATGTTCACTTCAACCTCGCGGTGGTACATTCTCAAATAGGCAA
CTTGTCCGGCGCGATAGAGCATTACACGTACGCCATACAAGCGAACCCGAATCACATCCG
TGCGCTGTACAACTCGGCGGTTATTTTCGAAGAAACCGGCGACAAAGATTTGGTGAGACG
CGCCAAAGTAAGAGTGAAAAGAGTTCTAGAACTGGAGCCCGACAACCATCTGGCTTTATC
GTTGATGGGATCTATACACCTCGATGAAGGAAATGAGAAACTGGCTGTTTCGAATTGGGG
AAAGGTCCTGAGAATACACCCGGGTGATAAGTCCGCTTTGTATAACATGGCGCAAATGTA
CTCGAAAAAGGCGGACGCAACTTCCGAAGCTATTGAAACTATAGAAACACTTTTAGACCA
TCACCCAAACTATGTAAAAGGCTTGATGTTGTACGGAGACATGTTGTTGAATCAAAGGAA
AGATTACAAAGCGGCTAGCGATGCTTTTAAAAAAATTATCGACGCCGACCCGAGCCATGT
TCAAGCGAGACACAATTACTGTGTAGTTATTTTACAAGAAGGCAAACTCACTGAAGCCGA
ACAATGTATGGAGAAAGTTCTTTCTATGGCGCCAGACGCCAGCTTTGTCATTAACAATCT
TGCTATTATCAGAAAACATATCGCGAAACGTTCTGCACAAAGTCAGAATGCCGTAAAGTT
TACTTCTGAAGACGGAGGTAATACCGCTGAGAAGCTTGAGGTTAAGAGCGCTTCCAGACA
AGAGGATGATGAGGCTGTATTCGTAGAACCTGCAAGGAAGAAGCCAGCGTTTTCAAAGCG
TGCCGCTGCTATCCTGGAAGATACGAAATCGACGGTGGCCAACTTGGAAAACCGCAATTC
TCAAGACCGACTTCAAGATATCGAGAAAGCTTTAAGGAAAGTGAAGTCGTCCGTGAAGAA
ATTGACGAGCATGAGTGAGCAGGTGTCGAATGTAATGGACGAGAAATGCCCGTCGAAAAA
GATTGATGTGAAAGATAGTGGCAAAGATGCGCCTAGGCCTGATCGGGTTGATGGGCTCCG
CAGGAAAGCCTTAAAAGCTTTGGAGGATCTAGAGGCGAGCCTAGATTA
| Pfam |
DUF1736 (IPR013618) - T[48-118] 1.5E-25 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[221-319] 6.5E-14 - T[320-439] 2.0E-23 - T[440-692] 2.1E-28 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[222-525] 3.03E-38 - T[507-607] 9.49E-15 |
| SMART |
TPR_repeat (IPR019734) - T[235-267] 43.0 - T[268-301] 2.0 - T[351-384] 1.7E-4 - T[385-418] 1.7E-5 - T[419-455] 290.0 - T[456-489] 12.0 - T[490-524] 270.0 - T[525-559] 300.0 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[235-267] 6.343 - T[268-301] 8.762 - T[351-384] 8.791 - T[385-418] 10.768 - T[456-489] 7.552 - T[526-559] 6.785 - T[560-593] 6.903 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[251-593] 52.041 |
| Pfam |
TPR_repeat (IPR019734) - T[270-300] 0.036 - T[492-523] 0.013 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMTC1_HUMAN | 30.435 % | 244 | 3.51E-69 |
| TMTC4_HUMAN | 30.258 % | 203 | 1.08E-55 |
| TMTC3_HUMAN | 41.242 % | 503 | 2.21E-166 |
