- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g39108.01.t
Possible name(s)
HOXA10; HOXC10; HOXD10
Gene model
Location
chrUn [257,447,042 / 257,448,509]
Amino acid sequence
Length: 207
>Boschl.CG.Botznik2013.chrUn.g39108.01.p
EDPTKHWLTANGRKKRVPYTKYQLLELEKEFHYNQYLSRERRQEVAKAVTLSDRQVKIWF
QNRRMKWKKEKKEEKVRDGISLPPPPHILHPHNHGNPMHQAHFSPLTHYSGTAAAFAAAA
SMGHHHHHPSAGGIGTHHHPHFNGSISGHNGPPSHFQHPSYSTPHSAMPGSMAAVAAADF
FSSFQHHHGYQVPRDPSGGLQLGCMYN
Nucleotide sequence
Length: 626
>Boschl.CG.Botznik2013.chrUn.g39108.01.t
CGAAGACCCCACGAAACACTGGCTGACCGCCAACGGCCGCAAGAAAAGAGTTCCGTACAC
AAAGTACCAACTACTCGAACTAGAGAAAGAGTTCCATTACAACCAATACCTGTCGCGCGA
ACGCAGACAAGAAGTAGCCAAAGCGGTCACCCTCTCCGACAGACAGGTCAAGATTTGGTT
TCAAAACAGGAGGATGAAATGGAAGAAAGAGAAAAAGGAGGAGAAGGTCCGCGACGGAAT
CAGTCTTCCCCCGCCGCCTCATATTCTCCACCCTCACAACCACGGGAATCCGATGCATCA
AGCTCACTTTTCGCCACTTACTCATTACTCTGGTACGGCAGCAGCTTTCGCAGCAGCGGC
TAGCATGGGCCACCACCATCATCACCCTTCAGCTGGCGGTATCGGTACACATCACCACCC
TCACTTCAACGGATCAATATCAGGACACAACGGCCCGCCTTCTCACTTTCAACACCCCTC
CTATTCAACCCCCCATTCCGCCATGCCTGGTTCGATGGCCGCTGTCGCCGCGGCTGATTT
TTTTTCGTCATTCCAGCACCACCATGGCTATCAAGTACCCCGCGATCCATCGGGCGGGTT
ACAGCTGGGGTGCATGTATAACTGAT
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[8-72] 1.33E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[10-70] 21.637 |
| SMART |
Homeobox_dom (IPR001356) - T[12-74] 3.8E-26 |
| CDD |
Homeobox_dom (IPR001356) - T[13-65] 6.03888E-24 |
| Pfam |
Homeobox_dom (IPR001356) - T[13-69] 4.4E-22 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[34-45] 7.0E-8 - T[49-59] 7.0E-8 - T[59-68] 7.0E-8 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[45-68] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXD10_HUMAN | 65.823 % | 117 | 7.15E-32 |
| HXC10_HUMAN | 63.415 % | 115 | 5.46E-31 |
| HXA10_HUMAN | 66.216 % | 112 | 2.1E-29 |
