- Transcript 'Cisavi.CG.ENS81.R37....' >
- Transcript 'Cisavi.CG.ENS81.R25....' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.C7.344.v1....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g36554.01.t
Possible name(s)
ITGA3; ITGA6; ITGA7
Gene model
Location
chrUn [239,606,010 / 239,607,737]
Amino acid sequence
Length: 206
>Boschl.CG.Botznik2013.chrUn.g36554.01.p
RFGEASLQPDESNIILGESVSSSFGYSIATTDINGDGLDDLIVGAPQYYERSLKRKAGGA
VYVYTNAVGKGFKHIEPKVLYGPPNSNFGYAVAAIGDMDQDGYNDFAVGAPYQDDHGTVH
VYRGKDLFIIFCAGYKMTNSQIPYARRHNERVKTVAPSVLATRHGVIAISNRNRLRRLQH
FQVIVIAIDYIRNNSEVIVIDYTSHI
Nucleotide sequence
Length: 623
>Boschl.CG.Botznik2013.chrUn.g36554.01.t
TCGCTTTGGCGAAGCCTCTCTTCAGCCTGATGAATCAAACATCATCTTGGGCGAATCTGT
GTCGTCCAGCTTTGGCTATTCAATCGCAACAACAGACATAAACGGAGACGGACTCGATGA
TCTGATCGTTGGAGCGCCGCAGTATTACGAACGAAGTCTGAAGAGAAAAGCGGGTGGAGC
GGTGTACGTATACACGAATGCAGTTGGAAAAGGCTTCAAGCACATTGAACCTAAGGTTTT
GTACGGACCACCGAATTCGAACTTCGGCTATGCCGTTGCAGCAATAGGGGATATGGACCA
AGACGGGTACAATGATTTTGCAGTTGGAGCTCCTTACCAGGACGATCATGGCACAGTACA
TGTTTACAGGGGTAAAGATCTATTTATAATATTTTGTGCAGGCTATAAAATGACGAATAG
TCAGATCCCTTATGCCCGACGTCATAATGAAAGAGTAAAGACAGTAGCACCTAGCGTCCT
AGCGACCAGACATGGGGTAATTGCGATTAGTAATCGTAATCGATTACGACGATTACAGCA
TTTTCAAGTAATCGTAATCGCAATCGATTACATTCGAAATAATTCCGAAGTAATCGTAAT
CGACTATACTTCCCATATCTAAT
| Gene3D |
Integrin_alpha_N (IPR028994) - T[4-155] 1.2E-39 |
| ProSiteProfiles |
Int_alpha_beta-p (IPR013519) - T[8-73] 13.927 - T[74-131] 12.236 |
| PRINTS |
Integrin_alpha (IPR000413) - T[17-37] 1.7E-19 - T[87-111] 1.7E-19 |
| SMART |
Int_alpha_beta-p (IPR013519) - T[20-76] 4.0E-12 - T[84-134] 1.9E-9 |
| Pfam |
FG-GAP (IPR013517) - T[24-64] 1.3E-12 - T[88-122] 1.3E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITA7_HUMAN | 47.863 % | 112 | 1.32E-28 |
| ITA6_HUMAN | 50 % | 110 | 5.03E-28 |
| ITA3_HUMAN | 46.789 % | 107 | 4.25E-27 |