- Transcript 'Harore.CG.MTP2014.S2...' >
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- Transcript 'Cisavi.CG.ENS81.R112...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g36484.01.t
Possible name(s)
HMCN1; HMCN2; PXDN
Gene model
Location
chrUn [239,139,893 / 239,145,511]
Amino acid sequence
Length: 323
>Boschl.CG.Botznik2013.chrUn.g36484.01.p
MFTSKDLLKEIEISDHQAEFICNVKTVYGDKVFERNYTMPKFNVNYQTQTASFKSEPDAY
LGEDIRLSCSADGFPTPTISIDDVEGEELTVTVTEDLNGKSYVCKAYNNELQADNPVVSS
PYVLNVMSLAEPTFVGIEDKAAAYKIGDSISVNCSSAGNPAPMYAWYQGDKKVSDSGLLT
IESASLSDTGEYNCRVTNGHQNLNKDSTLAITVNGISMVGEETRDVEGEEGKEVNLECSV
SANPKPTFTWTTDGKTVSGAIESTLGNYKYTSQLKVGPLNTDLSKKEYVCTASGHDQADV
SQTFVLPGKFHQNSKRYIRAVMT
Nucleotide sequence
Length: 972
>Boschl.CG.Botznik2013.chrUn.g36484.01.t
GATGTTTACCAGTAAAGACCTTCTGAAGGAAATTGAAATATCTGATCACCAAGCCGAATT
CATCTGTAAGGTGAAAACCGTTTACGGAGACAAAGTCTTCGAACGAAACTATACGATGCC
CAAGTTCAACGTGAACGACCAAACTCAGACTGCCAGCTTCAAAAGCGAGCCAGACGCGTA
TCTTGGTGAAGATATCAGGTTGAGTTGTTCTGCCGATGGTTTCCCGACACCTACAATAAG
CATCGATGACGTAGAAGGTGAAGAGCTCACAGTTACGGTCACGGAAGACCTGAACGGAAA
ATCGTACGTTTGCAAAGCATATAACAATGAACTGCAAGCAGATAATCCAGTTGTATCGTC
GCCGTACGTCCTGAACGTTATGGGTCTGGCCGAACCTACTTTTGTCGGGATTGAAGATAA
AGCAGCAGCATACAAGATCGGAGACTCAATCTCCGTTAACTGTTCGTCTGCCGGTAACCC
GGCACCAATGTACGCGTGGTACCAAGGTGACAAAAAGGTGTCGGACTCAGGCCTGCTAAC
GATCGAGTCCGCGTCATTGTCCGACACCGGAGAATACAATTGCCGAGTCACGAACGGCCA
CCAGAACTTGAACAAGGATTCGACACTCGCGATTACTGTGAATGGAATTTCAATGGTCGG
AGAGGAGACACGGGACGTAGAAGGCGAAGAAGGCAAAGAGGTGAACTTGGAATGTTCGGT
CAGCGCTAACCCGAAACCAACGTTTACGTGGACAACCGACGGCAAAACCGTGTCAGGCGC
GATTGAATCCACATTGGGCAATTACAAATATACGAGTCAACTTAAAGTGGGGCCTCTTAA
TACTGACCTTTCCAAGAAAGAGTATGTCTGTACCGCATCTGGACACGACCAGGCGGATGT
CAGCCAGACATTTGTTTTGCCAGGTAAATTTCATCAGAATTCTAAACGATATATCAGGGC
TGTAATGACTTG
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[40-119] 6.724 - T[132-210] 13.203 - T[217-301] 9.519 |
| SMART |
Ig_sub (IPR003599) - T[54-127] 31.0 - T[139-214] 1.2E-7 - T[223-306] 7.1E-4 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[55-126] 3.55E-6 - T[142-211] 6.23E-13 - T[225-294] 5.35E-10 |
| Gene3D |
Ig-like_fold (IPR013783) - T[123-213] 3.2E-14 - T[214-310] 5.2E-12 |
| Pfam |
Ig-like_dom (IPR007110) - T[143-212] 1.6E-11 |
| SMART |
Ig_sub2 (IPR003598) - T[145-201] 1.4E-9 - T[229-297] 0.033 |
| Protein Name | Identity | Bit Score | e-value |
|---|