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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g36169.01.t

Possible name(s)

BNC1; BNC2; SALL3

Gene model

Boschl.CG.Botznik2013.chrUn.g36169

Location

chrUn [236,749,897 / 236,754,350]

Sequences

Amino acid sequence

Length: 1,126

>Boschl.CG.Botznik2013.chrUn.g36169.01.p
MPLPSSYAVAATSPVHQSMVTPALSGSVTEEEISFHPDRSNSSSPEGSEPDRPSQLLWHK
RDEDSAKNSDAGSASTSEKPPDETLILNNGVDASRLSRETGSGRSDFFEQSQQIHCRRRK
RKSQNPSRVADSDDETASDESPREDCHFYKEESEALNTESSDGGERNPNDAKDGRNPTYE
LTHSCDIRESVSPEETDEISSRFEMEKDERKRTRIGKDTAAGKRIRHHSCADSDPNLVIE
TLNLKDIDSSKYQAQPLSEGSATPHNKSSKHDYDASNRRDKSGEFAMPPVPFRSNVKSPL
SPSFPSNSSIYSSSPDDKIKAPFFPHHVMAGLSKSPPAMSHSFLGTDLCGGGAAIGANPL
LHSPTLPSSAGHLYSSIDYTSLPGGEIRSGIWIPTRSRNCHICGKEFKNVYSKLRLRGIY
ADTRICAQTADMTEMLRESFLPSLLSIPQIEKSPRPPDKVNSDAATKKNRISSDYNPERT
QKHENSDTSMPRQVNHDHVVVSDRDLENVDEREYLSKQSPHKDTRDRSPRKSGERDGQNR
QQLGKDAKEAGEMKDQERLYYKFLAEAFNGIRERHGNDSHRSDKLNGLANMSAVARMPFF
SPTFQMNAGTPPKIPFPRTYSTFSSREELPYHNSSAGNQGSKSPIHGTPAQSDARECDKH
ETPHRSRNNPNKDELQKMTDHRAHAKVVKNDKQLSQNDRSNDRSRALKEHDLKYDDLDRP
FTFSSMPLPLGVPGAEQTSNLLPGLMNLMGKYPFYNEAVANRNVEIARYLQPGNILFDYF
HKHLANSALIPDVLGKRKQEDVFMSRSSEKVHDIDHRGLARSPKRRKLDNESSSTRPDAA
NDKNGILKPRLVEISSPTHQVATENEFVEQRRKRQNPDKNSVGRSYDVSYKSQREGSRYP
KPAVSEAVSQGIEMPFHPLFNRSMFPSSPPMPFGTASHLKALNPASQMTLQAPSPIMSSN
PYLPSLMGDQNTSFMNATLMAAALSRQKNALPFPPTSSALYNINPFASNFFAPKLQSPVM
QGIERQTVTSIASTEEMMRALDGVTEMDDPTLGMEGNTWKTGPVQCSICNRMYSNKGTLR
VHFKSVHLREMHRCTVQGCDMMFTSVRSRNRHSQNPNLHRTLPYHP

Nucleotide sequence

Length: 3,381

>Boschl.CG.Botznik2013.chrUn.g36169.01.t
TGCCTCTACCGTCATCATATGCGGTTGCGGCAACATCGCCCGTGCATCAGAGCATGGTAA
CTCCCGCTCTCAGCGGATCTGTAACGGAAGAGGAGATTTCTTTTCACCCGGATCGGAGCA
ACAGCTCATCGCCGGAAGGCTCGGAGCCCGACCGGCCTTCGCAGTTACTGTGGCATAAGC
GCGACGAAGACAGCGCCAAGAATAGCGATGCGGGATCGGCATCTACGTCGGAAAAACCTC
CCGATGAGACTTTGATTTTGAATAATGGAGTAGATGCGTCAAGATTATCGAGAGAGACAG
GGTCAGGTCGGAGCGATTTCTTTGAACAAAGCCAGCAGATACACTGTCGCAGACGTAAAC
GAAAGTCGCAAAATCCTTCCCGTGTCGCGGATAGTGATGACGAAACTGCGTCAGATGAAT
CTCCTCGTGAAGATTGTCACTTTTATAAAGAGGAATCGGAGGCGCTCAATACTGAATCAA
GTGACGGAGGTGAACGCAATCCCAATGATGCAAAGGACGGTCGCAATCCGACGTATGAAC
TTACGCACTCTTGCGATATCCGGGAAAGTGTTTCGCCCGAAGAAACTGACGAAATATCAT
CGAGATTTGAGATGGAAAAGGATGAGAGGAAGCGTACGCGTATCGGGAAAGACACCGCAG
CAGGGAAAAGAATACGACATCATTCTTGCGCGGACAGTGATCCGAATTTAGTTATCGAGA
CGTTAAACTTGAAAGACATTGATTCATCAAAATATCAGGCGCAGCCGTTATCAGAAGGAA
GTGCTACTCCCCACAACAAATCAAGCAAGCACGACTACGATGCGTCAAATAGGCGCGATA
AAAGTGGCGAATTCGCGATGCCGCCTGTCCCTTTCAGATCCAACGTAAAAAGTCCCTTAT
CGCCGTCTTTTCCTTCCAACTCTTCAATATATTCATCGTCTCCAGATGACAAAATAAAGG
CCCCGTTCTTTCCACATCACGTGATGGCGGGTTTATCGAAATCGCCGCCGGCAATGTCTC
ACAGTTTTCTGGGCACAGATTTGTGCGGGGGCGGCGCTGCGATTGGAGCTAATCCGCTGT
TGCATTCGCCTACCCTGCCATCGTCGGCAGGTCATTTGTATTCGTCAATTGACTATACCT
CCTTGCCGGGTGGCGAAATTCGAAGTGGAATATGGATCCCGACGCGATCAAGAAACTGTC
ACATTTGCGGGAAGGAATTCAAAAACGTATACAGGAAACTGCGTCTGCGAGGAATTTATG
CCGACACGAGGATTTGTGCCCAAACTGCAGACATGACGGAAATGTTGCGGGAAAGCTTTC
TACCTTCTCTATTATCAATACCTCAGATTGAGAAATCACCGCGACCGCCAGACAAAGTCA
ACAGCGATGCGGCTACAAAGAAGAATCGGATTTCATCAGATTATAACCCCGAACGCACCC
AAAAACATGAAAACTCTGATACGAGCATGCCACGACAGGTAAATCATGACCACGTGGTAG
TGAGTGATAGAGACCTCGAAAACGTCGACGAACGCGAATATCTCAGTAAACAGTCACCAC
ATAAGGATACACGAGACAGATCACCGCGAAAATCCGGCGAAAGAGACGGGCAAAATCGTC
AACAACTTGGGAAAGACGCGAAAGAGGCTGGCGAAATGAAAGATCAAGAGAGGCTTTATT
ACAAGTTCTTGGCAGAAGCATTCAACGGAATTCGGGAAAGGCACGGAAACGACTCGCATC
GCTCTGATAAACTGAATGGACTAGCAAATATGTCGGCAGTCGCACGAATGCCGTTTTTCA
GTCCGACATTTCAGATGAACGCGGGAACTCCGCCGAAGATTCCATTTCCGCGGACATATT
CAACTTTTTCTTCTCGAGAAGAGTTACCGTATCATAATTCGTCGGCGGGCAATCAAGGAA
GCAAGTCTCCTATTCACGGCACTCCTGCCCAGTCCGATGCGCGTGAATGTGACAAACACG
AAACACCCCACCGCTCAAGAAACAATCCGAATAAAGACGAGCTTCAAAAGATGACGGACC
ACCGAGCCCATGCCAAGGTGGTCAAGAATGACAAACAATTGTCGCAAAATGACAGATCCA
ACGACAGATCAAGGGCGTTGAAAGAGCATGATCTCAAGTATGATGACTTGGATCGTCCAT
TCACTTTTTCATCAATGCCACTACCGCTTGGGGTTCCTGGCGCCGAGCAAACTTCAAATC
TCTTGCCCGGACTTATGAATTTGATGGGGAAATATCCATTTTACAACGAAGCCGTTGCCA
ATAGAAATGTCGAAATTGCAAGATATCTGCAGCCGGGAAATATTCTTTTTGATTATTTCC
ACAAACATCTTGCCAATTCTGCACTGATCCCCGATGTCTTGGGCAAAAGAAAGCAAGAGG
ATGTATTTATGAGTAGATCCTCTGAGAAAGTGCATGATATTGACCATAGAGGCCTCGCGA
GAAGTCCCAAGCGAAGAAAATTGGATAACGAAAGTTCCTCAACCCGTCCGGATGCAGCAA
ATGACAAGAATGGAATACTTAAACCAAGACTCGTCGAAATATCTAGTCCAACTCACCAGG
TTGCAACTGAGAACGAATTCGTTGAGCAACGTCGGAAGAGGCAAAATCCAGACAAAAATT
CAGTTGGAAGATCATATGATGTATCTTACAAGTCGCAACGGGAAGGATCAAGATATCCAA
AACCAGCCGTGTCCGAGGCCGTTTCTCAGGGGATCGAAATGCCATTCCACCCACTCTTCA
ATCGCTCGATGTTTCCGTCTTCACCACCAATGCCATTTGGTACAGCTAGTCATTTGAAGG
CATTAAACCCGGCGAGTCAAATGACATTACAAGCTCCATCGCCAATCATGTCTTCTAATC
CCTACCTTCCATCTCTGATGGGCGATCAAAACACGAGCTTCATGAATGCCACCCTAATGG
CAGCAGCATTATCAAGGCAGAAAAATGCATTGCCTTTTCCCCCGACATCGTCCGCGCTGT
ACAATATAAATCCCTTTGCTTCGAACTTTTTCGCGCCTAAATTACAAAGCCCGGTCATGC
AAGGCATAGAGCGACAGACCGTGACTAGTATTGCGTCGACGGAAGAAATGATGCGTGCTC
TTGATGGAGTGACGGAAATGGACGATCCTACGCTGGGAATGGAGGGGAACACCTGGAAAA
CTGGTCCAGTGCAATGTAGCATCTGTAACAGAATGTACAGCAACAAAGGTACCTTGAGGG
TACATTTCAAATCCGTCCATCTGCGGGAAATGCACCGCTGCACAGTACAGGGGTGTGATA
TGATGTTTACATCTGTCCGAAGTCGCAACCGTCACAGCCAGAATCCTAACTTACATCGAA
CTCTACCATACCATCCCTAAT

InterProScan

SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[1061-1091] 9.77E-5
SMART
Znf_C2H2_type (IPR013087) - T[1064-1087] 0.0043 - T[1092-1119] 0.81
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[1064-1092] 9.91
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[1066-1087] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BNC2_HUMAN 73.016 % 116 3.01E-26
BNC1_HUMAN 62.5 % 102 8.47E-22