- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'KH2012:KH.L65.6.v1.A...' >
- Molecular Tool 'Cirobu.Foxd.b>Cirobu.Tbx6-r.b' >
- Transcript 'Moocci.CG.ELv1_2.S44...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g34999.01.t
Possible name(s)
FOXD1; FOXD3; FOXD4
Gene model
Location
chrUn [228,711,025 / 228,712,360]
Amino acid sequence
Length: 444
>Boschl.CG.Botznik2013.chrUn.g34999.01.p
MNRFPYYREKFPKWQNSIRHNLSLNDCFVKVPREPGNPGKGNYWTMDPDAEDMFDNGSFL
RRRKRFKRQNRNPLRDHMIAAALSGVPTPYGRPYGIPMPSQSMTGLPASFTPYPYISGLP
HAYSMMHQAPRSHQGYYNVMGSGSTKPSTLSPPVIMQPMMSQYRRYMTCLENVRQDNNIF
GANLRTKSNLPVLCMSSECPKMNLEQCDSSARTSNGNTAPSAFSIDTLIGSETDSSTTHR
KHTSRKREAHLNMRQRRSSGCSCSSFTSPDKESGISTKMEYQLSESDSETQRNNDGSDTS
AAPAFRKSNPGKAGDISSANIAEADRIAYSNSKPTVTNKVDNCADFMNLRNQFSTFNPSV
AGDDPFRDSGVLYNSIFHAAVAGRIGRISGVDHRLMPFPDISANHVMTLASPYPTQNNPI
PSSENTQPRMDALLRWPMARNAFL
Nucleotide sequence
Length: 1,335
>Boschl.CG.Botznik2013.chrUn.g34999.01.t
CATGAACCGTTTTCCGTATTACCGCGAAAAGTTCCCGAAATGGCAGAATTCGATACGCCA
CAACTTGTCTCTGAACGATTGTTTCGTAAAAGTGCCACGAGAACCAGGCAATCCCGGCAA
AGGTAACTACTGGACAATGGACCCAGATGCTGAAGATATGTTTGACAATGGATCGTTTCT
GAGGCGCCGTAAAAGATTTAAGAGACAAAATCGCAATCCCTTGAGGGACCATATGATAGC
CGCCGCTTTGAGCGGTGTACCGACACCGTACGGCAGACCGTACGGAATTCCCATGCCGAG
TCAAAGCATGACTGGTTTACCTGCCTCATTTACTCCTTACCCCTACATTAGCGGTCTGCC
ACATGCATATTCTATGATGCATCAAGCTCCACGATCGCACCAAGGATATTACAATGTCAT
GGGCTCGGGCAGTACGAAGCCCTCTACTCTCAGCCCACCGGTTATTATGCAGCCAATGAT
GTCCCAGTACAGAAGATACATGACGTGTTTAGAGAATGTACGCCAGGACAACAATATCTT
TGGTGCAAATTTGCGCACAAAGTCGAATCTGCCAGTGTTATGTATGTCGTCCGAATGTCC
CAAAATGAATTTGGAACAATGCGATTCGTCGGCCAGAACCTCAAATGGAAATACCGCACC
TTCAGCGTTCTCGATTGACACGCTTATTGGAAGTGAAACCGATTCATCAACAACACACCG
AAAACATACTTCTCGAAAAAGAGAGGCCCATTTGAACATGAGACAGAGGCGAAGTTCTGG
TTGCTCGTGTTCCTCATTCACGTCACCCGATAAAGAATCGGGAATATCAACCAAAATGGA
ATATCAACTAAGTGAATCCGACTCGGAAACGCAACGAAATAACGACGGTAGCGATACGTC
GGCCGCGCCGGCCTTTAGAAAGTCAAATCCCGGCAAAGCGGGTGATATATCCTCGGCCAA
TATCGCAGAGGCCGATCGAATAGCTTATTCTAATTCTAAACCAACTGTCACGAACAAAGT
CGATAATTGCGCTGACTTCATGAACTTGCGCAATCAATTCTCTACCTTCAATCCATCAGT
CGCGGGAGACGATCCTTTTAGGGACTCCGGTGTGTTGTACAACTCCATTTTCCACGCGGC
CGTTGCGGGGAGAATTGGCAGAATCTCCGGCGTCGACCATAGACTCATGCCCTTCCCAGA
TATCAGTGCGAACCACGTCATGACTCTGGCTTCGCCTTACCCGACTCAGAATAATCCGAT
TCCGAGCTCTGAAAATACCCAGCCGAGAATGGACGCGCTCTTACGATGGCCAATGGCCAG
AAACGCGTTTTTGTG
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[1-64] 28.248 |
| SMART |
Fork_head_dom (IPR001766) - T[1-58] 9.1E-23 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[1-64] 3.49E-23 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[1-69] 4.2E-28 |
| Pfam |
Fork_head_dom (IPR001766) - T[2-54] 1.1E-20 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[14-20] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXD4_HUMAN | 53.333 % | 141 | 1.84E-37 |
| FOXD3_HUMAN | 69.524 % | 134 | 7.82E-35 |
| FOXD1_HUMAN | 87.719 % | 125 | 1.99E-31 |