- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g34647.01.t
Possible name(s)
CCT3; CCT4; CCT5
Gene model
Location
chrUn [226,424,615 / 226,427,249]
Amino acid sequence
Length: 382
>Boschl.CG.Botznik2013.chrUn.g34647.01.p
MKKIIASAIGTKFISKWTDLATEMAIKAVATVAIEDKTSGQREIDIKRYAKVEKVPGGVI
EESRVLQGVMLNKDITHPRMKRRIENPRILLLDCPLEYTKGESQTDIELSKENDFNRILQ
LEEEYIRRVTSEIIAFKPDLVFTEKGISDLAQHFLVKAGITAIRRVRKSDNNRIARACGA
TVCSRTDEIREEDLGTGAGLFEIRKFGDEYFTFITECKNPKACTILLRGASKDILMEVER
NLQDAMQVARNVMVDARLVPGGGAVEMAVAQRMAEKSKSMTGVEQWPYRAVAQALEVIPR
TLIQNCGASTIRTITALRAKHTEPDNKTWGVDGETGQIADMTVLNIWEPLSVKVQTYKTA
METAMLLLRIDDIVSGVKKTDN
Nucleotide sequence
Length: 1,149
>Boschl.CG.Botznik2013.chrUn.g34647.01.t
TGAAGAAAATCATTGCGAGCGCGATCGGAACAAAGTTCATCAGCAAATGGACCGATCTCG
CGACTGAAATGGCTATCAAAGCCGTCGCTACTGTAGCTATCGAGGACAAAACGTCCGGAC
AACGGGAAATTGACATCAAGCGGTATGCAAAAGTAGAGAAGGTTCCTGGAGGCGTGATCG
AAGAATCGAGAGTGCTCCAAGGGGTCATGCTCAACAAAGACATCACCCATCCGAGAATGA
AGAGACGCATCGAAAATCCCAGAATTTTACTCTTGGACTGTCCTTTGGAATACACGAAAG
GAGAGAGCCAGGCCGACATTGAACTCTCGAAAGAGAACGACTTCAACCGGATCCTTCAGC
TGGAGGAAGAGTACATCAGAAGGGTCACTTCCGAAATCATTGCCTTCAAACCAGACCTAG
TTTTCACGGAGAAAGGCATATCAGGCCTCGCCCAGCATTTCCTGGTTAAGGCCGGCATTA
CGGCCATCCGCCGAGTGCGCAAGTCCGACAACAATCGTATCGCGAGGGCCTGCGGAGCCA
CCGTGTGTTCTCGAACCGACGAAATCCGCGAGGAAGATTTGGGAACCGGCGCAGGCCTGT
TCGAAATCCGTAAATTCGGCGACGAGTATTTCACCTTCATTACCGAGTGTAAAAATCCTA
AGGCGTGTACGATTCTTCTCCGCGGCGCCAGCAAAGATATTCTCATGGAGGTGGAGAGAA
ATCTGCAGGATGCGATGCAAGTCGCAAGAAACGTGATGGTCGACGCCAGGCTTGTGCCTG
GTGGCGGCGCTGTGGAAATGGCCGTGGCCCAGGGAATGGCGGAAAAATCCAAATCGATGA
CCGGCGTGGAGCAGTGGCCGTACCGAGCGGTAGCTCAGGCTTTGGAAGTTATCCCGCGAA
CGCTGATCCAGAATTGCGGCGCGAGCACCATTAGAACGATTACGGCTCTGCGGGCCAAAC
ACACGGAGCCTGACAACAAGACCTGGGGCGTCGACGGGGAAACGGGTCAAATCGCCGATA
TGACTGTGTTGAATATTTGGGAGCCGTTGTCGGTTAAGGTGCAAACGTACAAGACCGCTA
TGGAGGCTGCGATGCTGCTGCTCCGAATTGACGATATTGTTTCTGGCGTGAAGAAAACGG
ATAATTGAA
| TIGRFAM |
Chap_CCT_gamma (IPR012719) - T[1-379] 5.5E-199 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[1-380] 7.2E-205 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[2-375] 3.5E-116 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[8-36] 2.35E-36 - T[256-376] 2.35E-36 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[60-225] 1.5E-67 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[62-229] 1.41E-55 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[224-246] 8.6E-7 - T[258-270] 8.6E-7 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[226-382] 3.9E-50 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPG_HUMAN | 71.768 % | 575 | 0 |
| TCPD_HUMAN | 30.667 % | 174 | 1.49E-49 |
| TCPE_HUMAN | 32.52 % | 200 | 3.61E-59 |