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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S44...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Haaura.CG.MTP2014.S6...'
  4. Transcript 'Phmamm.CG.MTP2014.S3...'
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g34647.01.t

Possible name(s)

CCT3; CCT4; CCT5

Location

chrUn [226,424,615 / 226,427,249]

Sequences

Amino acid sequence

Length: 382

>Boschl.CG.Botznik2013.chrUn.g34647.01.p
MKKIIASAIGTKFISKWTDLATEMAIKAVATVAIEDKTSGQREIDIKRYAKVEKVPGGVI
EESRVLQGVMLNKDITHPRMKRRIENPRILLLDCPLEYTKGESQTDIELSKENDFNRILQ
LEEEYIRRVTSEIIAFKPDLVFTEKGISDLAQHFLVKAGITAIRRVRKSDNNRIARACGA
TVCSRTDEIREEDLGTGAGLFEIRKFGDEYFTFITECKNPKACTILLRGASKDILMEVER
NLQDAMQVARNVMVDARLVPGGGAVEMAVAQRMAEKSKSMTGVEQWPYRAVAQALEVIPR
TLIQNCGASTIRTITALRAKHTEPDNKTWGVDGETGQIADMTVLNIWEPLSVKVQTYKTA
METAMLLLRIDDIVSGVKKTDN

Nucleotide sequence

Length: 1,149

>Boschl.CG.Botznik2013.chrUn.g34647.01.t
TGAAGAAAATCATTGCGAGCGCGATCGGAACAAAGTTCATCAGCAAATGGACCGATCTCG
CGACTGAAATGGCTATCAAAGCCGTCGCTACTGTAGCTATCGAGGACAAAACGTCCGGAC
AACGGGAAATTGACATCAAGCGGTATGCAAAAGTAGAGAAGGTTCCTGGAGGCGTGATCG
AAGAATCGAGAGTGCTCCAAGGGGTCATGCTCAACAAAGACATCACCCATCCGAGAATGA
AGAGACGCATCGAAAATCCCAGAATTTTACTCTTGGACTGTCCTTTGGAATACACGAAAG
GAGAGAGCCAGGCCGACATTGAACTCTCGAAAGAGAACGACTTCAACCGGATCCTTCAGC
TGGAGGAAGAGTACATCAGAAGGGTCACTTCCGAAATCATTGCCTTCAAACCAGACCTAG
TTTTCACGGAGAAAGGCATATCAGGCCTCGCCCAGCATTTCCTGGTTAAGGCCGGCATTA
CGGCCATCCGCCGAGTGCGCAAGTCCGACAACAATCGTATCGCGAGGGCCTGCGGAGCCA
CCGTGTGTTCTCGAACCGACGAAATCCGCGAGGAAGATTTGGGAACCGGCGCAGGCCTGT
TCGAAATCCGTAAATTCGGCGACGAGTATTTCACCTTCATTACCGAGTGTAAAAATCCTA
AGGCGTGTACGATTCTTCTCCGCGGCGCCAGCAAAGATATTCTCATGGAGGTGGAGAGAA
ATCTGCAGGATGCGATGCAAGTCGCAAGAAACGTGATGGTCGACGCCAGGCTTGTGCCTG
GTGGCGGCGCTGTGGAAATGGCCGTGGCCCAGGGAATGGCGGAAAAATCCAAATCGATGA
CCGGCGTGGAGCAGTGGCCGTACCGAGCGGTAGCTCAGGCTTTGGAAGTTATCCCGCGAA
CGCTGATCCAGAATTGCGGCGCGAGCACCATTAGAACGATTACGGCTCTGCGGGCCAAAC
ACACGGAGCCTGACAACAAGACCTGGGGCGTCGACGGGGAAACGGGTCAAATCGCCGATA
TGACTGTGTTGAATATTTGGGAGCCGTTGTCGGTTAAGGTGCAAACGTACAAGACCGCTA
TGGAGGCTGCGATGCTGCTGCTCCGAATTGACGATATTGTTTCTGGCGTGAAGAAAACGG
ATAATTGAA

InterProScan

TIGRFAM
Chap_CCT_gamma (IPR012719) - T[1-379] 5.5E-199
PANTHER
Cpn60/TCP-1 (IPR002423) - T[1-380] 7.2E-205
Pfam
Cpn60/TCP-1 (IPR002423) - T[2-375] 3.5E-116
SUPERFAMILY
GROEL-like_equatorial_sf (IPR027413) - T[8-36] 2.35E-36 - T[256-376] 2.35E-36
Gene3D
GroEL-like_apical_dom_sf (IPR027409) - T[60-225] 1.5E-67
SUPERFAMILY
GroEL-like_apical_dom_sf (IPR027409) - T[62-229] 1.41E-55
PRINTS
Chaperone_TCP-1 (IPR017998) - T[224-246] 8.6E-7 - T[258-270] 8.6E-7
Gene3D
GROEL-like_equatorial_sf (IPR027413) - T[226-382] 3.9E-50

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TCPG_HUMAN 71.768 % 575 0
TCPD_HUMAN 30.667 % 174 1.49E-49
TCPE_HUMAN 32.52 % 200 3.61E-59