- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g32945.01.t
Possible name(s)
EED; LRWD1; TAF5L
Gene model
Location
chrUn [215,109,735 / 215,110,950]
Amino acid sequence
Length: 404
>Boschl.CG.Botznik2013.chrUn.g32945.01.p
MDAEIRISSPSKRSKKSHVYPEDDTQLLKTHCFLQSHDSDNDPGNFSVQIWSCKFQPEST
DIVATCGGDTVCIIDVNTAKVLSKFFKQGEEFYTLDWAQIHCKKFTSNILACGGCFGNVY
LINAEQFCVYGFFRAHTKPVQELCFVPGNPNLLLTAGNERKICLWDIGELSLPDYHFSYK
KLATFSGLHYSPLKMLVYQEDYLFCATEGGLFCWYVKDGFVSGKSIRTHSNPSEAKFLFV
EEEPCVDGLEIVDNDLIATKCAQSGVIFLWKPSNALREIQQGKSSFKANVVDELKWSNTD
QLYLSITTAGRYLFAGDDKGRIWIYDCNKKGSKRDSKKLKPYIPGKPRPALQIVDWPVCE
RDDKIPIDSLANGPMINNITCEKDLQYLVAAGNNNLICIYKIAL
Nucleotide sequence
Length: 1,215
>Boschl.CG.Botznik2013.chrUn.g32945.01.t
CATGGATGCTGAAATACGTATATCGTCGCCTTCAAAACGCAGCAAAAAATCTCACGTCTA
CCCGGAAGATGATACCCAGCTCCTCAAAACTCACTGCTTCTTGCAGTCTCATGACTCAGA
TAACGATCCCGGCAACTTCTCGGTGCAAATCTGGTCCTGCAAATTCCAACCGGAATCCAC
AGATATTGTGGCTACGTGTGGAGGAGACACGGTATGCATCATCGATGTCAATACCGCAAA
GGTACTTTCGAAGTTCTTCAAACAAGGGGAAGAGTTTTACACTTTAGACTGGGCGCAAAT
TCACTGTAAAAAGTTTACGTCTAATATTCTAGCGTGCGGTGGTTGCTTTGGGAATGTATA
CTTGATTAACGCTGAGCAATTCTGCGTTTATGGATTCTTCAGAGCCCACACCAAGCCTGT
TCAAGAACTATGCTTTGTACCTGGAAATCCTAACCTTTTGCTGACTGCAGGAAATGAAAG
GAAAATATGTCTATGGGATATCGGAGAATTGTCACTGCCCGACTACCATTTCTCATATAA
GAAGCTTGCGACTTTTTCCGGGCTGCACTACAGCCCTTTAAAAATGTTAGTTTACCAGGA
AGATTACTTATTTTGTGCTACAGAAGGCGGCCTTTTTTGTTGGTATGTCAAAGACGGTTT
TGTGTCCGGTAAGAGTATCCGCACGCATTCGAATCCGTCAGAGGCGAAATTTTTATTTGT
GGAAGAAGAACCTTGTGTTGACGGCTTGGAGATTGTCGATAATGATTTAATTGCGACTAA
ATGCGCTCAAAGTGGGGTTATTTTCTTGTGGAAACCAAGCAATGCATTGCGAGAGATCCA
ACAAGGAAAATCTTCATTTAAAGCAAATGTTGTCGACGAATTAAAATGGTCTAATACAGA
TCAACTTTATTTGAGTATTACAACAGCCGGCAGGTATTTATTCGCGGGTGATGACAAGGG
TCGTATTTGGATCTACGATTGCAACAAGAAGGGTTCAAAACGAGATTCGAAGAAGTTGAA
GCCGTATATACCGGGTAAACCGAGGCCAGCGTTACAGATTGTTGATTGGCCAGTATGTGA
GCGAGATGATAAGATACCTATCGACTCGTTGGCTAATGGACCGATGATCAACAATATCAC
TTGCGAAAAGGACTTACAGTATCTCGTGGCTGCTGGAAATAACAATTTGATTTGCATTTA
CAAAATTGCTTTGTA
| SMART |
WD40_repeat (IPR001680) - T[30-75] 5.9 - T[126-166] 8.4E-5 - T[287-326] 150.0 - T[363-401] 110.0 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[38-402] 4.2E-47 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[48-329] 1.63E-30 - T[375-402] 1.63E-30 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[133-167] 9.974 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[133-175] 9.177 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRWD1_HUMAN | 29.524 % | 181 | 3.56E-51 |