- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Boleac.CG.SB_v3.S76....' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Clone 'AHC0AAA172YE08' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g32583.01.t
Possible name(s)
APAF1; NOL10; WDR83
Gene model
Location
chrUn [212,778,162 / 212,784,330]
Amino acid sequence
Length: 585
>Boschl.CG.Botznik2013.chrUn.g32583.01.p
MQVTSPNNVKIYNLSQGKSLPEFLSDAKKRALLKKDVALRRRIELIQDFSMPTVSTKVKV
TPDGNYIFAAGTYKPRIKCFDVNQLSLKFERCIDAEVAAFEILTEDYSKIAMLLNDRYVE
LHSQEGRWYRIRMPKFGRDLQYHPANCDLYLVGAGPEIYRLNLSHGQFFKSFMTDAKELN
VCELNKEHHLLAVGTIDGKVECWDPRSKQRVGVLDCALNIADMSDDLDSCVCPEITALKF
KGALQMAVGTSNGRVLLYDIRTNKPFVNKDHHYDLPIHSIDFNNDNKIVISSDQRCVKLW
DENTGAPVTAVEPEHDINHMHIVKDSGLLFLANESSKIQTFFIPMLGPAPKWASFLDSLT
EELEENPTQELYDDFKFITVKELESLGLSHLIGSSLLRAYMHGYFMDIRLYHKAKSIANP
FAYSEYRKKKIHEKIEESRENRVQIKKLPKVNRNLAEKLMHQSNDLELKSGKKKKQKKEA
ESLLGDNRFKAMFENPEFQINEESEEFQVINPVVTKKFDKMRKKKIAKDEDDVLSDKEDL
PKQAKNPKAKEAKMYQLKTDQEFYTMKDLSKVKHDDIKKRRKIMK
Nucleotide sequence
Length: 1,758
>Boschl.CG.Botznik2013.chrUn.g32583.01.t
TGCAAGTTACGAGCCCCAACAACGTAAAAATCTACAACTTGAGCCAAGGAAAGTCGTTGC
CTGAGGTCTTGTCTGATGCTAAGAAAAGAGCATTACTTAAGAAAGATGTAGCATTGCGGA
GAAGAATTGAACTGATACAGGATTTTTCAATGCCAACTGTCAGCACAAAGGTTAAAGTTA
CCCCGGACGGAAATTACATATTTGCTGCGGGGACGTACAAACCACGCATAAAATGCTTCG
ACGTCAATCAGCTTTCTCTCAAGTTTGAAAGGTGCATCGATGCAGAAGGTGCTGCCTTTG
AAATTCTGACCGAAGACTATTCAAAAGTTGCAATGTTGTTAAACGACCGCTATGTAGAAC
TGCATTCGCAAGAGGGACGCTGGTACAGAATCAGGATGCCAAAGTTTGGCCGAGATTTAC
AATATCACCCGGCAAACTGTGACTTATACCTAGTCGGGGCTGGGCCGGAAATTTATCGTC
TCAATCTTAGTCACGGACAGTTTTTCAAATCTTTTATGACTGATGCTAAGGAGCTTAATG
TCTGCGAATTAAATAAGGAGCATCATTTGCTGGCCGTGGGGACGATTGACGGAAAGGTGG
AATGTTGGGACCCACGGTCGAAGCAGAGGGTCGGGGTGTTGGATTGCGCTTTGAATATCG
CGGATATGTCTGATGACTTAGAGTCGTGTGTATGTCCGGAGATTACAGCGTTAAAGTTCA
AAGGTGCGCTGCAGATGGCGGTAGGAACCAGCAATGGTCGGGTTCTGCTCTACGACATCC
GCACGAATAAGCCTTTTGTGAACAAAGACCATCACTACGACCTGCCCATCCATTCGATAG
ATTTTAACAACGACAACAAGATCGTGATATCGTCCGACCAGAGATGCGTGAAACTCTGGG
ACGAGAACACAGGTGCACCAGTTACGGCCGTCGAACCGGAACACGACATCAATCATATGC
ACATCGTGAAAGACAGCGGGCTGTTGTTTCTGGCGAATGAGAGCAGCAAGATTCAGACAT
TTTTCATACCCGTGCTGGGCCCTGCTCCGAAATGGGCTTCTTTCCTGGACAGCTTGACGG
AGGAACTCGAGGAAAATCCGACCCAAGAATTGTACGACGATTTCAAATTCATCACCGTGA
AGGAATTGGAAAGTCTAGGCCTGTCGCATCTGATCGGGTCTTCGTTGCTGCGAGCGTATA
TGCACGGATATTTTATGGACATTCGGCTGTATCACAAGGCAAAATCGATAGCGAATCCGT
TCGCGTATAGCGAGTATAGGAAGAAGAAGATTCATGAGAAGATTGAAGAGTCGAGAGAGA
ACCGCGTTCAAATCAAGGAATTACCTAAAGTCAACAGGAATCTTGCGGAAAAACTAATGC
ACCAATCTAACGATCTCGAACTGAAGAGTGGCAAAAAGAAAAAACAAAAGGAAGAAGCGG
AGTCGCTTCTTGGCGACAATCGGTTCAAAGCTATGTTCGAAAATCCCGAGTTCCAAATTA
ACGAGGAATCTGAAGAATTTCAAGTTATCAACCCTGTCGTCACCAAGAAATTCGATAAAA
TGCGAAAGAAAAAGATCGCGAAAGATGAGGATGACGTATTATCAGATAAAGAAGATGTGC
CCAAGCAAGCGAAGAATCCAAAAGCGAAAGAGGCTAAGATGTATCAATTAAAGACCGATC
AAGAATTCTACACGATGAAGGATTTGAGCAAAGTCAAGCATGACGATATTAAAAAGCGAC
GCAAAATTATGAAGTAAG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[41-220] 1.1E-9 - T[229-345] 3.4E-12 |
| SMART |
WD40_repeat (IPR001680) - T[42-81] 360.0 - T[165-204] 1.7 - T[225-259] 320.0 - T[262-301] 0.16 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[42-339] 6.11E-30 |
| Pfam |
WD40_repeat (IPR001680) - T[272-301] 0.013 |
| Pfam |
NUC153 (IPR012580) - T[486-513] 7.1E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOL10_HUMAN | 59.924 % | 671 | 0 |