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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g31945.01.t

Possible name(s)

SH3RF1; TRIM2; TRIM3

Location

chrUn [208,794,047 / 208,800,475]

Sequences

Amino acid sequence

Length: 300

>Boschl.CG.Botznik2013.chrUn.g31945.01.p
MEKIAELLDCPVCLDRFKQPKVLPCQHSYCLRPCLQNLVQDNSIRCPECRACHNLPRNGI
EGLPINLMAVRLIDQQKPRRQCKECDVGDGDVDKCHHCDESLCRKCIADHTRGLQQDLRH
SLIQVRRLVTKLAESDYDLRERAKKLEENGRNMKREISQSIERFILELQSRKKALFKDVD
ALVTMETGSLQREQGELKVEMAALTTHCQIATELCERTLNMSNPEIQQFQSEILCLTQRG
RDHVQSDGVPSDKVRQSIKLTNGDENLVLYAISNFGTVSAHAQLAYGADEVPKGANGRAS

Nucleotide sequence

Length: 901

>Boschl.CG.Botznik2013.chrUn.g31945.01.t
AATGGAGAAAATTGCAGAACTTCTTGATTGTCCAGTGTGTTTGGATCGTTTCAAGCAACC
AAAAGTGTTGCCTTGTCAGCATTCCTACTGTTTGAGACCCTGCCTACAGAATCTCGTCCA
AGATAACAGTATTCGCTGTCCCGAATGTCGCGCTTGCCACAACCTGCCGCGTAATGGAAT
CGAAGGTCTGCCAATAAATTTGATGGCCGTGAGATTAATCGATCAACAGAAACCGCGTCG
ACAATGCAAGGAATGTGATGTGGGAGATGGTGATGTGGACAAGTGCCACCATTGCGACGA
GTCCCTGTGTAGAAAGTGCATTGCGGATCACACACGCGGTTTGCAGCAAGATTTGCGTCA
CTCTCTCATTCAGGTGAGGCGACTCGTCACCAAACTGGCAGAATCGGACTATGATTTACG
AGAGAGAGCGAAGAAGTTGGAAGAAAATGGAAGGAACATGAAACGCGAAATATCACAGTC
GATAGAACGTTTCATCTTGGAACTGCAGTCGCGAAAGAAAGCTCTGTTCAAGGATGTAGA
CGCGTTGGTCACCATGGAAACCGGATCATTGCAACGTGAGCAGGGAGAGCTTAAAGTAGA
AATGGCGGCTTTGACAACTCACTGCCAGATCGCAACGGAGTTATGCGAACGAACACTTAA
TATGAGCAATCCAGAAATTCAGCAATTCCAGAGCGAAATACTTTGTTTGACGCAACGAGG
TCGTGACCATGTCCAGAGCGACGGAGTCCCGTCGGACAAAGTTCGTCAGAGCATAAAGTT
GACGAATGGCGACGAAAACCTCGTGCTGTACGCAATATCCAATTTCGGCACCGTTTCCGC
GCACGCGCAACTCGCATATGGGGCGGACGAGGTCCCAAAAGGCGCAAACGGCAGGGCATC
A

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[1-86] 4.7E-15
SMART
Znf_RING (IPR001841) - T[10-49] 3.6E-5
Pfam
Znf_C3HC4_RING-type (IPR018957) - T[10-49] 3.3E-8
ProSiteProfiles
Znf_RING (IPR001841) - T[10-50] 10.866

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value