- Transcript 'Moocul.CG.ELv1_2.S77...' >
- Transcript 'Moocci.CG.ELv1_2.S64...' >
- Transcript 'Moocul.CG.ELv1_2.S43...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g31898.01.t
Possible name(s)
TDRD1; TDRD15; TDRKH
Gene model
Location
chrUn [208,564,724 / 208,567,736]
Amino acid sequence
Length: 1,003
>Boschl.CG.Botznik2013.chrUn.g31898.01.p
MHVEIDSAFVNEISQQFKSCVNVSPTKSNGSVSRSMPVEIPSPVKAGSNVEVQLLDLEDS
GLIVCLTSGHNPDYSKLDTLHKYYSDGHGEVPSVVKPGCFYACPFSTDAVWYRVSVEDVS
EDASTCRVWYVDFGNFENAQMCDLRILTPGYAAVPMRTVRCKLLVGDCVPPSKIREFFTE
SLSDPVVKIKVFKMVAAVAHVEMYGLVAGKLSFLNDLLVGDDVVNNEKQDQMPNPGKEDI
CPDEKQTDKIDITNHHNVNISPSASTTTSVLTTRMSLGAMPKSGAGDANSLSDNMQIANS
SPKLQSVFKKFQPKASKKRPDLEIQPIVIPKGKFNGFVTHVKSVEELYVCLESDKEILCA
MQSFLKEACSPDNSPEPYKKDMLCVYFDDTTNMCHRGRILATKEDKIRLFLLDDGRTKIV
HSKNLCKLPMDSKYFVPPKAIPCKLKGCTLGDADYNIESGNLLKNCENEVMTMEIDETKE
SGLNPVTIYVSVEGTWMTVNWCVDNLRDDCELSSLPSRESLGNAEMVSTPERVTKTTPAA
SPKSVSPKKNPEVLVNHEPVQDPIANPVLSPKCKSASESNTVSPPVALPTLPISEILIAG
KDVRIAITNVVSPAKFTFQILPGSFAEFNKFCDEMTSYYSKQDVKAPDTIQIGGVYAARY
RLDERWYRAKVSESMPDANAFKVIFLDFGNVEDVSCDDVRILHENYSKMPIQGMEGRLYR
YSPIDGDSVSECVRVMNSIMSNEIAAVVRGFDVDGDSTLLDIYAADDGVTLTDLFVQHQL
AKLLPSEEVKDNKCEKPDIEVGVVTSTGERHETGSSNSIIDVPDTLKTPDEHILQRIIPV
SPTVGETGDVIMVHAIDPNEFYCQLITDELKAVLIKLSELNDSTAEIEMLVSGVVGQYCL
ARSSDGQLYRAEIIADDKDDSFTVRFVDYGNSEVVPRGNVTNMPKEYFLMESQAVKCSLH
GCGPVDGVWSEDAIAVMKYLIERLGRAKFIGRGTDDVFEISLV
Nucleotide sequence
Length: 3,012
>Boschl.CG.Botznik2013.chrUn.g31898.01.t
TGCACGTTGAGATTGACTCGGCTTTCGTAAACGAAATTTCGCAGCAATTTAAATCTTGTG
TGAATGTGTCGCCCACGAAATCGAACGGATCTGTTTCCAGATCCATGCCTGTTGAAATTC
CCTCCCCCGTCAAAGCCGGGAGCAATGTGGAAGTTCAACTTCTCGATTTGGAAGACAGCG
GATTGATCGTTTGCCTGACAAGTGGTCACAATCCCGATTATTCAAAGTTAGACACGCTTC
ACAAGTATTATTCGGACGGACACGGCGAAGTCCCGTCTGTTGTAAAACCAGGTTGCTTTT
ACGCCTGTCCATTTTCGACGGACGCAGTTTGGTACCGAGTCTCTGTTGAGGATGTCTCTG
AAGATGCGTCGACTTGTAGGGTTTGGTATGTCGACTTTGGAAATTTTGAGAATGCGCAAA
TGTGTGATTTGAGGATTCTCACGCCCGGTTACGCCGCTGTTCCGATGCGCACGGTCCGGT
GCAAACTACTCGTAGGTGATTGCGTTCCTCCATCTAAGATTCGTGAATTTTTCACGGAAT
CCCTGTCGGACCCTGTCGTGAAGATTAAGGTTTTTAAAATGGTAGCGGCTGTTGCTCATG
TCGAAATGTACGGGCTCGTTGCAGGTAAATTATCTTTTCTCAATGATTTGCTTGTAGGTG
ACGACGTGGTGAACAACGAGAAGCAAGATCAAATGCCGAACCCCGGAAAAGAAGACATAT
GTCCTGATGAAAAGCAAACAGACAAGATTGACATTACAAATCATCATAATGTGAATATTT
CTCCTTCAGCGTCCACAACAACGTCTGTCCTTACGACTCGCATGTCACTTGGTGCTATGC
CGAAGTCTGGCGCTGGCGATGCGAACTCGCTCTCAGATAACATGCAGATAGCGAATTCAT
CGCCGAAGCTGCAGTCTGTATTCAAGAAATTTCAACCGAAAGCATCGAAAAAGCGTCCCG
ATTTGGAGATTCAACCCATCGTCATTCCGAAAGGTAAATTCAACGGCTTTGTGACACACG
TTAAGAGCGTGGAGGAGCTGTATGTTTGCCTCGAATCGGATAAGGAGATCCTGTGTGCGA
TGCAATCGTTTTTGAAAGAGGCGTGCTCGCCTGATAACAGCCCTGAACCTTACAAAAAGG
ATATGCTTTGCGTGTACTTCGACGACACTACCAATATGTGTCATCGCGGTAGGATTCTTG
CAACGAAGGAAGATAAAATTAGGCTGTTTCTCTTGGACGATGGTCGCACAAAGATCGTAC
ATTCTAAGAATCTTTGCAAACTTCCCATGGACAGCAAATATTTCGTTCCGCCGAAAGCTA
TTCCTTGCAAGCTGAAGGGCTGCACGCTCGGAGATGCAGATTACAACATCGAAAGCGGAA
ACCTGCTGAAGAATTGCGAAAACGAAGTCATGACTATGGAGATCGACGAAACGAAAGAAA
GCGGACTTAATCCGGTCACGATATATGTATCGGTAGAAGGTACATGGATGACCGTTAATT
GGTGTGTCGATAATTTGCGCGATGATTGTGAACTGTCATCTCTTCCATCGAGGGAATCTT
TGGGTAATGCTGAAATGGTATCAACCCCAGAGCGAGTGACTAAAACAACACCTGCTGCAT
CTCCGAAGTCAGTATCTCCAAAGAAAAATCCCGAGGTATTAGTAAATCACGAACCTGTAC
AAGATCCCATTGCAAATCCTGTACTTTCTCCAAAGTGCAAGTCTGCTTCAGAAAGTAATA
CGGTTTCACCTCCAGTAGCATTACCAACACTGCCAATCTCGGAGATCCTAATCGCAGGAA
AAGATGTGAGGATAGCAATCACCAATGTTGTCAGCCCCGCGAAATTCACGTTTCAGATAC
TCCCCGGCAGCTTTGCGGAATTCAACAAATTCTGTGACGAAATGACTTCATACTATTCAA
AGCAGGATGTGAAAGCACCCGATACTATCCAGATTGGAGGTGTCTACGCAGCAAGATACC
GTCTTGACGAGAGGTGGTACCGTGCAAAGGTCTCGGAATCGATGCCGGATGCTAATGCTT
TTAAAGTTATTTTTCTGGATTTTGGAAACGTTGAGGATGTCAGCTGCGATGATGTGAGAA
TCCTTCACGAAAATTACTCTAAAATGCCGATTCAAGGCATGGAAGGCAGGCTTTATCGGT
ATTCTCCGATTGACGGCGACAGTGTCTCTGAATGTGTACGCGTCATGAATTCGATAATGA
GCAATGAGATTGCTGCCGTTGTACGCGGATTTGACGTAGACGGAGATAGTACCTTGTTGG
ATATATATGCCGCCGATGATGGAGTTACGTTGACTGATCTATTTGTGCAGCATCAACTTG
CCAAGCTCTTGCCTAGCGAGGAGGTTAAGGATAACAAGTGTGAAAAACCCGATATTGAGG
TGGGTGTCGTTACGTCAACTGGCGAACGTCATGAAACAGGATCTTCAAATTCCATAATCG
ATGTACCTGATACATTGAAAACTCCGGATGAACACATCCTACAACGGATAATTCCGGTGT
CACCCACTGTGGGCGAAACTGGAGATGTTATCATGGTTCATGCTATTGATCCTAATGAAT
TTTACTGCCAGTTGATCACCGACGAGCTGAAAGCCGTTCTTATAAAGCTGTCGGAACTCA
ACGATAGCACCGCCGAGATTGAGATGCTGGTATCCGGCGTAGTCGGCCAATATTGTTTGG
CACGTTCTTCAGACGGTCAACTGTATCGTGCGGAAATCATTGCCGACGACAAGGACGATT
CCTTCACCGTTCGGTTTGTAGACTATGGGAATTCAGAGGTTGTGCCACGCGGGAATGTTA
CGAATATGCCGAAGGAATACTTCTTAATGGAATCTCAGGCCGTAAAATGCAGTCTGCACG
GATGTGGTCCTGTCGACGGTGTTTGGTCTGAAGATGCAATTGCCGTGATGAAATATCTGA
TCGAGCGGCTTGGCAGGGCAAAGTTTATTGGCCGGGGCACGGATGATGTCTTCGAGATTA
GTCTGGTCTGAG
| Pfam |
Tudor (IPR002999) - T[47-163] 1.4E-15 - T[333-447] 2.9E-12 - T[600-719] 1.6E-20 - T[844-961] 8.6E-21 |
| ProSiteProfiles |
Tudor (IPR002999) - T[92-154] 12.638 - T[649-709] 14.089 - T[892-950] 15.117 |
| SMART |
Tudor (IPR002999) - T[93-152] 2.5E-6 - T[375-433] 5.5 - T[648-707] 4.3E-11 - T[891-948] 2.9E-14 |
| Gene3D |
SNase_OB-fold_sf (IPR035437) - T[606-633] 4.6E-27 - T[706-767] 4.6E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TDRD1_HUMAN | 22.335 % | 102 | 5.28E-22 |
