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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g31713.01.t
Possible name(s)
EMX1; EMX2; VAX1
Gene model
Location
chrUn [207,371,541 / 207,373,024]
Amino acid sequence
Length: 410
>Boschl.CG.Botznik2013.chrUn.g31713.01.p
MMILDQRQLDSSGDVESQATQTNKLGFDIASLVYGQSKSNSKSPSTINDKVTVASAQVSA
RFHPYIRQEHLRRFEDGCADKTMGQNAFSFDESNVKSRLTSTSPLRNGRCSLSPSSTDMS
PTLVGFNSPLPTMANISQIPYPYPYPRNAESQSTQIMDPAILHAMAVAAASGLGHRLPGH
NPTIPSSLQNPFMQTTTSQHQPQIPHSTISPAALAQRGHPFSLLPDGRTTYNPWLLRQSA
ALTRPFHPSATADPMMRARFGFFLSNPFHRKPKRIRTAFTPGQLLQLEKEFTKNHYVVGA
ERKQLARSLKLTETQVKVWFQNRRTKYKRQKIEEKAGVHRESLGEDDGETNESDDIELED
DEELTVEDDESDNEHALDNGFSLMNNQAVCNRYFVNVKHERQDDIPVSFT
Nucleotide sequence
Length: 1,233
>Boschl.CG.Botznik2013.chrUn.g31713.01.t
TGATGATATTAGATCAAAGACAACTGGACAGTTCCGGCGACGTGGAATCGCAAGCCACGC
AGACAAATAAGCTGGGATTCGACATTGCGTCGCTCGTGTACGGACAGTCTAAATCCAATT
CGAAGTCGCCTTCCACCATCAATGATAAAGTGACAGTAGCTTCGGCTCAAGTATCAGCAA
GATTTCACCCGTACATCCGACAGGAACATCTTCGACGGTTCGAAGATGGGTGCGCTGATA
AAACAATGGGACAGAACGCTTTTTCGTTTGACGAATCAAACGTTAAAAGTAGACTCACGT
CGACTTCTCCATTGCGTAACGGACGATGTTCGCTGTCACCTAGCTCGACTGACATGTCTC
CGACTTTGGTTGGCTTTAACAGTCCATTACCAACTATGGCCAATATTTCCCAAATTCCCT
ATCCCTATCCATACCCTAGAAATGCCGAATCTCAATCAACTCAGATCATGGATCCGGCAA
TCCTCCATGCCATGGCAGTCGCTGCCGCATCTGGATTGGGACACCGTCTACCAGGACATA
ACCCGACGATCCCATCATCTCTACAAAATCCATTTATGCAAACTACCACGTCCCAGCATC
AACCACAAATTCCGCATTCAACAATTTCGCCTGCAGCTCTTGCACAACGAGGGCATCCCT
TCAGTTTACTTCCCGACGGGAGAACTACCTACAATCCGTGGCTGCTGCGTCAATCTGCGG
CTTTAACAAGACCGTTCCATCCGTCAGCTACTGCCGGTCCTATGATGAGAGCAAGATTCG
GGTTCTTCCTGTCGAATCCATTTCACCGTAAACCTAAAAGAATACGAACCGCTTTTACCC
CTGGTCAATTGCTGCAGCTTGAAAAAGAGTTTACGAAGAACCATTACGTAGTTGGAGCAG
AACGAAAACAGCTTGCAAGATCCTTGAAATTAACTGAGACACAGGTTAAAGTATGGTTCC
AGAATCGTCGTACAAAGTACAAACGCCAGAAAATCGAAGAGAAGGCCGGTGTTCACAGGG
AATCGCTTGGAGAAGACGATGGTGAAACCAACGAATCCGATGATATTGAATTAGAAGATG
ATGAAGAATTAACTGTGGAAGACGATGAATCTGATAACGAACACGCTTTGGATAATGGCT
TTAGCCTAATGAACAATCAGGCTGTTTGTAATCGTTACTTTGTGAATGTTAAACACGAAA
GACAAGACGATATCCCCGTATCGTTTACATAGG
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[254-331] 8.13E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[270-330] 21.119 |
| SMART |
Homeobox_dom (IPR001356) - T[272-334] 2.6E-26 |
| Pfam |
Homeobox_dom (IPR001356) - T[273-329] 1.4E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[273-331] 9.14629E-23 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[294-305] 4.2E-5 - T[309-319] 4.2E-5 - T[319-328] 4.2E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[305-328] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VAX1_HUMAN | 66.102 % | 85.1 | 2.45E-18 |
| EMX2_HUMAN | 60.185 % | 127 | 2.94E-34 |
| EMX1_HUMAN | 77.632 % | 126 | 8.34E-34 |