Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g31194.01.t

Possible name(s)

FSCN1; FSCN2; FSCN3

Gene model

Boschl.CG.Botznik2013.chrUn.g31194

Location

chrUn [204,014,225 / 204,018,449]

Sequences

Amino acid sequence

Length: 284

>Boschl.CG.Botznik2013.chrUn.g31194.01.p
MTPWGVNTLITLVYKERGYGLMTADNRFLAKDGTLCDSFDKTTTKYTLEFYAGCIAFKDG
DGKYLSPQGPQGAVKATKAKVTKDEKFSMQDSHPQFYLLSKTRGRYVSVKQGVQVVANQM
EPSEENTETFQMEINPDTGMWSFRTTSENYWHADGSNNIMADTGKRDQSSWFEIEWQDRC
IKLKTASGKYVGVKSGGNLVVKSEPGDAEDFVLKLINRSVYTVDGYLHDVLPHPTSRVEQ
RCNFQLFQIRLELGLGLPYFGNRKRGHLFRNLRLAKPEKILKNR

Nucleotide sequence

Length: 855

>Boschl.CG.Botznik2013.chrUn.g31194.01.t
GATGACCCCGTGGGGCGTCAACACCCTGATCACCCTCGTCTACAAAGAAAGGGGATACGG
TCTGATGACGGCCGACAATCGATTCCTCGCCAAGGACGGCACCCTGTGCGACTCTTTCGA
CAAGACCACAACCAAATACACGTTGGAGTTTTACGCGGGATGCATCGCTTTTAAAGACGG
AGATGGAAGGTACCTCTCCCCGCAAGGACCGCAAGGCGCCGTGAAAGCCACCAAGGCCAA
AGTGACCAAAGACGAGAAGTTTTCGATGCAAGACTCCCACCCGCAATTTTATCTCCTCTC
GAAGACGAGAGGAAGATACGTTTCGGTAAAGCAAGGCGTACAGGTGGTAGCGAACCAGAT
GGAGCCGTCTGAGGAAAACACCGAAACGTTCCAGATGGAAATCAATCCTGATACCGGCAT
GTGGAGTTTCCGTACCACGTCCGAGAATTACTGGCACGCGGACGGGAGCAATAACATCAT
GGCTGACACCGGGAAGAGAGATCAAAGCTCTTGGTTTGAGATCGAGTGGCAAGACCGATG
CATCAAGTTGAAGACAGCCAGCGGCAAATACGTGGGAGTCAAGTCGGGAGGCAACTTGGT
CGTGAAAAGCGAACCCGGCGACGCGGAAGACTTCGTTTTGAAGCTCATCAACCGGTCAGT
ATATACAGTCGACGGATATCTACATGACGTCTTGCCGCATCCTACCAGCCGAGTTGAACA
GCGATGTAATTTTCAGCTTTTCCAAATTAGATTAGAATTAGGATTAGGCTTACCATATTT
TGGAAATCGAAAAAGAGGACACCTTTTCAGAAATCTGAGACTTGCAAAACCGGAGAAGAT
TCTCAAAAATCGGTG

InterProScan

SUPERFAMILY	Actin-crosslinking (IPR008999) - T[2-87] 1.44E-14 - T[93-216] 1.74E-24
PANTHER	Fascin (IPR010431) - T[2-222] 1.1E-65
Pfam	Fascin-domain (IPR022768) - T[8-89] 7.9E-13 - T[104-210] 1.2E-15

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FSCN2_HUMAN	41.778 %	167	1.39E-48
FSCN1_HUMAN	43.111 %	178	1.93E-52