- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g30702.01.t
Possible name(s)
ARFGEF1; ARFGEF2; GBF1
Gene model
Location
chrUn [200,950,744 / 200,961,295]
Amino acid sequence
Length: 946
>Boschl.CG.Botznik2013.chrUn.g30702.01.p
MCIIFQDFSVPITESVTSQASTSSRQRLEQQLLSSQSFSHVLQKDAFLVFRSLCKLSMKP
LSEGPPDPRSHELRSKILSLQLLLSILESSGLVFRTNEMFINAIKQYLCVALSKNGVSNV
PEVFELSLAIFSKLLENFKTHLKMQIQVFFKEIFLNILETNSSSFDHKWMVLQTLAKICE
DAQIVVDIYVNYDCDINAANIFEQLVNVLSKISHQNIPGSNLTPGQEILMQTKSLECLVS
ILTCMVDWSKDLYIDPHSMSHLGKEHNPESGTPTVPLSVASSSSNINGSMQSVHSEDSSL
DQSFQTADNPETIEGIKQQKSILERGIQMFNIKPKKGVAFLQDQGMIGTTAADIAEFLSG
EERLNPGQVGDFLGENEALNKEVMYEYVDRLNFTGTEFVPALRLFLQGFRLPGEAQKIDR
MMEKFASRYCDCNPKGSVFASADTAYVLAYSIIMLTTDLHSSQVKRKIKVEDYIRMNRGI
NDSKDLPPEYLTDIYEQIKRQEITLKPTISQTVKGSKALSAAQKKQEMNNIADTAKALME
AVSHVQSSFISTKHHDHVRPMFQLSWRSMLVAFSMGLQDSEDTDTIRLCLKGMRCAIRIS
CIFGLMLERDTYVQALSRFSLLQANAGIREMKAKNIETIKTLINVAYTDGNYLQESWHEI
LQCISQLELLQLIGSKVRDQAATMKAVRSAVLTRTLGLENKKLASIQESMGETSSQSVVV
AVDRIFTGSTRLDGDAIVDFVRWLSKISLDELSNQQHPRMFCLQKIVEISYYNMGRIRMQ
WSRIWAILGDYFNAVGCNDEESIAFFAVDSLRQLSMKFLEKGELPGFSFQKDFLRPFEHI
MKHHTSPQIQDMVVRCIAQMVSSQAHNIKSGWKNIFAVFTLAAAHRDETIVELAFHTTST
VVTDTFNLYFQSIIYCFQDAISALREFSCCAFPDTSMEAIRLIRQC
Nucleotide sequence
Length: 2,838
>Boschl.CG.Botznik2013.chrUn.g30702.01.t
GATGTGCATCATATTTCAAGATTTTTCCGTGCCAATTACAGAGTCGGTGACCTCTCAAGC
CAGCACGTCGTCACGGCAGCGGCTGGAACAGCAACTCCTCAGCAGTCAATCATTTTCGCA
TGTTTTGCAGAAGGACGCCTTCCTGGTCTTTAGGAGTCTATGCAAGCTCAGTATGAAGCC
ATTGTCGGAAGGACCGCCGGACCCGAGGTCTCACGAGTTACGCTCCAAGATTCTTTCCCT
CCAGTTACTGTTATCTATATTAGAGTCTTCGGGATTGGTGTTTCGGACCAATGAAATGTT
CATCAATGCAATAAAACAGTATCTCTGTGTGGCTTTGAGCAAAAATGGAGTGTCCAACGT
ACCCGAAGTTTTCGAATTGTCGCTCGCCATTTTTTCGAAATTGCTAGAAAATTTCAAGAC
CCACTTGAAAATGCAAATTCAGGTGTTTTTTAAAGAAATATTTCTCAATATTCTCGAAAC
AAACAGTTCCTCGTTCGATCACAAGTGGATGGTACTACAAACTCTGGCGAAGATATGCGA
GGACGCTCAAATTGTTGTCGATATCTACGTGAATTACGATTGCGACATCAACGCCGCCAA
CATCTTTGAACAGCTCGTTAACGTTTTGTCGAAGATATCCCATCAGAATATACCGGGCTC
TAACTTGACCCCTGGTCAGGAAATCCTCATGCAAACGAAAAGTCTGGAGTGTTTGGTATC
CATCCTAACTTGTATGGTAGATTGGTCCAAGGACCTCTACATCGACCCGCATTCCATGTC
ACACCTCGGTAAAGAACACAACCCAGAGAGCGGCACCCCAACCGTGCCATTGTCTGTCGC
GTCATCCTCGTCAAATATCAACGGCAGCATGCAGTCTGTGCATTCCGAAGATTCGTCGCT
CGATCAGAGCTTCCAAACGGCCGATAATCCTGAGACTATCGAGGGCATCAAGCAGCAGAA
AAGCATTTTGGAACGGGGAATTCAAAGGTTCAACATCAAGCCGAAAAAAGGCGTCGCGTT
CCTTCAAGACCAAGGCATGATCGGTACCACGGCTGCGGATATCGCCGAGTTTTTATCCGG
GGAAGAAAGGCTGAACCCTGGCCAAGTCGGAGATTTTCTCGGGGAAAACGAAGGATTGAA
CAAAGAAGTCATGTACGAATACGTGGACCGGTTGAATTTCACCGGGACGGAGTTTGTGCC
GGCCCTGAGGCTGTTCCTGCAAGGCTTCCGCCTTCCCGGCGAGGCCCAGAAGATCGATAG
AATGATGGAGAAATTCGCCAGTCGATATTGCGACTGCAATCCAAGAGGCTCCGTGTTTGC
GTCTGCCGACACCGCGTACGTACTGGCATACAGCATCATCATGCTAACCACAGACTTACA
CAGCTCTCAGGTAAAACGCAAAATAAAAGTGGAAGACTACATCCGTATGAACCGCGGCAT
CAACGACAGCAAAGACTTGCCGCCTGAGTATCTCACCGACATCTACGAGCAAATCAAACG
CCAGGAGATCACCCTGAAACCGACCATATCGCAGACTGTGAAAGGCAGCAAAGCGCTGTC
CGCCGCTCAGAAGAAGCAGGAAATGAACAATATCGCCGACACGGCGAAGGCGCTCATGGA
GGCCGTAAGCCACGTGCAGTCGTCGTTTATCAGCACTAAGCATCACGATCACGTTCGACC
CATGTTCCAGTTATCCTGGCGGTCAATGCTGGTCGCATTTTCCATGGGGCTCCAAGACTC
GGAAGACACCGACACGATCCGGTTGTGCTTGAAAGGGATGCGGTGCGCCATTCGAATCTC
CTGCATATTCGGACTTATGCTGGAACGCGACACCTACGTGCAGGCGTTGTCGCGTTTCTC
GCTGCTGCAAGCCAACGCCGGGATTCGGGAAATGAAAGCGAAGAATATCGAAACCATCAA
GACCTTGATCAACGTGGCCTACACGGACGGCAACTACCTGCAAGAGTCTTGGCATGAGAT
TTTGCAATGCATATCCCAGCTCGAACTGCTGCAGCTCATCGGCTCCAAAGTTCGCGACCA
GGCCGCCACCATGAAGGCCGTGCGTTCCGCCGTATTGACGAGAACGCTGGGTTTGGAAAA
CAAGAAACTGGCATCCATACAGGAGTCGATGGGAGAGACCAGCTCGCAGAGCGTAGTGGT
CGCTGTCGATCGGATATTCACGGGTTCCACTCGGCTCGACGGTGACGCTATCGTTGACTT
CGTCCGATGGCTGAGCAAGATATCGCTGGACGAACTCAGCAACCAGCAGCACCCGCGCAT
GTTCTGCCTGCAGAAGATCGTCGAGATCTCTTACTACAACATGGGTAGAATCAGGATGCA
GTGGTCCAGGATCTGGGCGATACTTGGCGACTATTTCAACGCCGTGGGGTGTAACGATGA
GGAGAGCATCGCGTTCTTTGCCGTGGACAGCTTGAGGCAGTTGTCGATGAAGTTTTTGGA
GAAAGGGGAATTGCCCGGTTTCAGCTTTCAAAAAGACTTTCTACGGCCATTCGAGCATAT
CATGAAACATCACACTTCGCCACAAATCCAAGACATGGTGGTCCGGTGCATCGCGCAAAT
GGTGTCGTCACAGGCTCACAACATCAAGTCTGGCTGGAAAAATATCTTTGCCGTTTTCAC
GTTGGCCGCGGCGCATCGCGACGAAACCATCGTGGAGTTGGCTTTTCATACTACTTCTAC
TGTCGTTGCCGACACATTCAACCTCTACTTCCAATCTATCATCTACTGTTTCCAAGACGC
AATTTCGGCGCTGCGCGAATTCTCGTGCTGCGCCTTTCCGGACACGAGCATGGAGGCCAT
CAGACTCATCAGGCAATG
| Pfam |
Sec7_N (IPR032691) - T[43-201] 1.6E-49 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[69-251] 1.28E-11 - T[785-932] 1.28E-11 |
| ProSiteProfiles |
Sec7_dom (IPR000904) - T[312-501] 42.121 |
| SMART |
Sec7_dom (IPR000904) - T[316-503] 2.6E-91 |
| SUPERFAMILY |
Sec7_dom_sf (IPR035999) - T[317-506] 2.09E-69 |
| Pfam |
Sec7_dom (IPR000904) - T[319-503] 1.6E-64 |
| Gene3D |
Sec7_C_sf (IPR023394) - T[394-514] 9.7E-48 |
| Pfam |
Sec7_C (IPR015403) - T[817-898] 3.8E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BIG2_HUMAN | 64.362 % | 1196 | 0 |
| BIG1_HUMAN | 66.032 % | 1219 | 0 |
| GBF1_HUMAN | 22.789 % | 211 | 4.26E-56 |