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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g29780.01.t

Possible name(s)

TRIM2; TRIM3; TRIM71

Gene model

Boschl.CG.Botznik2013.chrUn.g29780

Location

chrUn [195,496,845 / 195,502,139]

Sequences

Amino acid sequence

Length: 154

>Boschl.CG.Botznik2013.chrUn.g29780.01.p
MFVRKNGSVEKRFQTPFYLSVVVSDCDNHRVLVFDSYDGRHFVQVGTNGSQFKTPRGVAT
DDQGNIIVCDKGNHRVQAIERFISELQSRKKCLMEEVDALVAMESNHKHKVRQTITVDFD
GVYVLIRHVSQTDFTQKPVLVSIDFDDVQYRDRL

Nucleotide sequence

Length: 465

>Boschl.CG.Botznik2013.chrUn.g29780.01.t
TGTTCGTTCGGAAGAACGGTTCGGTCGAAAAGCGTTTTCAAACACCGTTTTATCTTTCCG
TCGTCGTCAGTGATTGCGACAATCACAGAGTTCTGGTTTTCGACTCGTACGACGGCCGCC
ATTTTGTCCAGGTCGGAACGAACGGGTCTCAGTTCAAGACTCCGCGAGGTGTCGCCACAG
ATGATCAAGGCAACATTATCGTGTGCGACAAAGGCAACCACCGGGTTCAGGCTATAGAAC
GCTTCATCTCGGAACTGCAGTCGCGAAAGAAATGTCTGATGGAGGAAGTAGACGCGTTGG
TGGCCATGGAAAGCAACCACAAGCACAAGGTTCGGCAAACTATAACAGTTGATTTTGATG
GTGTGTATGTGCTGATCCGTCATGTATCGCAAACAGATTTTACTCAAAAGCCGGTATTGG
TATCCATTGATTTTGACGATGTTCAATACCGAGATCGGTTATGAC

InterProScan

Gene3D
6-blade_b-propeller_TolB-like (IPR011042) - T[18-148] 1.9E-15
ProSiteProfiles
NHL_repeat_subgr (IPR013017) - T[21-37] 8.553 - T[39-82] 13.364
Pfam
NHL_repeat (IPR001258) - T[52-77] 2.8E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value