- Transcript 'Boschl.CG.Botznik201...' >
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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g28683.01.t
Possible name(s)
AHI1; WDR44; WDR5B
Gene model
Location
chrUn [187,887,776 / 187,894,879]
Amino acid sequence
Length: 554
>Boschl.CG.Botznik2013.chrUn.g28683.01.p
VSPCLNPLALQIISRTREFSYTSSTTSVNSHEMPANPIAKLEYPDLVDSDSLSLASDDID
IGKDAGENKQRKGKTLKEKRKQLKKIVGKSVTKVKVVAGAQVEKAVHKVKHNKDDEQLNV
SSDEDSMELGSSSSIKIKASSSNKGPYHFSRPKQVQDIAVHVGAVWCMKFSHCGRLLATS
GQDNVIWVWVLKEFYGYFNDMRIKYDSKDDVLGPQEMMPQARAYSGNDDVFSSPVHSQER
NAMDDDEDTSPFRQVPFSSYVGHSADVLDLAWSKNYFVLSSSMDKTVRLWHISRKECLCC
FQHIDFVTAIAFHPRDDRYFLSGSLDSKLRLWNIPDKKVALWNEVSPEGSSASSNANGSS
GALITTVNFCENGKFAVCGTYDGRCVFFDTEHLKYHTQIHVRSSRGRNNKGHKVTGIEPL
PGEHKILVTSNDSRVRLYDLRDLSLVCKYRGHANMSSQIKASFSPDSKYIVCGSEDKCVY
IWKTTLPQDIKLSSLRRDRNDAWESMKGGKCRSIFGSLMNSMGKKTKIDLFTSLSINTLY
IDLTFRVVMTRVIF
Nucleotide sequence
Length: 1,665
>Boschl.CG.Botznik2013.chrUn.g28683.01.t
TCTCTCCGTGTCTGAACCCGTTGGCGTTGCAAATCATCAGCAGAACTCGTGAATTCTCAT
ACACAAGCTCGACCACATCTGTGAACTCGCACGAAATGCCGGCAAACCCAATCGCCAAGT
TGGAATACCCCGATCTTGTCGACAGCGATTCGTTGTCACTCGCCAGCGACGACATTGACA
TTGGTAAAGATGCCGGCGAAAACAAGCAACGAAAAGGCAAAACGTTGAAAGAGAAACGCA
AGCAGCTGAAGAAGATAGTCGGCAAAAGCGTCACCAAAGTCAAGGTGGTCGCCGGGGCTC
AAGTCGAGAAGGCCGTGCACAAAGTCAAGCACAATAAAGATGACGGACAATTAAACGTGT
CGAGTGACGAAGATTCGATGGAGCTCGGCTCGTCCTCCTCAATCAAGATCAAAGCTTCAT
CGAGTAACAAGGGCCCTTATCATTTTTCGCGTCCCAAGCAAGTGCAAGATATCGCAGTTC
ACGTGGGAGCTGTTTGGTGCATGAAATTCAGTCACTGTGGAAGGCTGCTCGCTACCTCCG
GCCAAGACAACGTCATCTGGGTGTGGGTTCTCAAAGAGTTTTACGGATATTTCAACGACA
TGCGAATCAAGTACGACAGCAAAGGTGACGTTCTGGGGCCGCAGGAAATGATGCCGCAAG
CCAGAGCGTATTCTGGCAATGACGACGTTTTTTCGAGTCCCGTTCACAGTCAGGAACGTA
ACGCGATGGATGATGATGAAGATACATCGCCGTTTAGACAGGTTCCTTTTTCCTCTTACG
TCGGACATTCCGCCGATGTGTTGGACCTGGCGTGGTCAAAGGATTATTTCGTCCTTTCTT
CTTCAATGGATAAGACGGTCCGGTTATGGCACATTTCGCGCAAAGAATGCCTCTGCTGTT
TTCAACATATCGATTTCGTTACTGCCATCGCTTTTCATCCGAGGGATGACCGATACTTTT
TAAGCGGATCGTTAGATAGTAAACTCAGACTGTGGAATATTCCCGACAAGAAAGTCGCGT
TATGGAACGAAGTCTCCCCGGAGGGATCTTCCGCGGCATCCAACGCAAACGGAAGCAGCG
GCGCTCTAATAACCACGGTGAATTTCTGCGAAAACGGAAAGTTTGCCGTGTGCGGCACGT
ACGACGGGAGATGCGTATTCTTCGATACCGAGGACTTAAAATATCATACGCAAATCCACG
TGCGTTCTTCAAGGGGCCGAAATAACAAAGGGCATAAAGTCACGGGCATCGAACCGTTAC
CGGGAGAACATAAAATCTTGGTGACTTCAAACGATTCTCGAGTTCGTTTATATGACTTAC
GAGACCTGTCGCTGGTGTGCAAGTACAGAGGACACGCCAACATGAGCAGTCAGATTAAAG
CGAGCTTCAGGCCCGATTCGAAATACATCGTCTGCGGTTCGGAAGACAAGTGCGTGTACA
TCTGGAAGACTACTCTGCCTCAAGATATCAAGTTGTCGTCTCTTAGAAGAGATCGGAACG
ACGCTTGGGAAAGCATGAAAGGTGGGAAATGTCGAAGCATATTCGGGTCCTTGATGAATT
CTATGGGGAAAAAAACAAAAATCGATCTTTTTACTTCCCTATCGATAAATACACTTTACA
TTGACCTTACATTCAGGGTTGTAATGACTCGAGTCATTTTCTGAT
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[150-193] 2.65E-52 - T[254-485] 2.65E-52 |
| SMART |
WD40_repeat (IPR001680) - T[151-190] 4.8E-6 - T[253-291] 1.4E-6 - T[294-333] 7.0E-8 - T[349-389] 12.0 - T[397-439] 7.9 - T[442-483] 1.2E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[158-199] 8.887 - T[260-492] 18.695 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[158-189] 10.107 - T[260-293] 11.845 - T[300-334] 11.143 - T[462-483] 8.971 |
| Pfam |
WD40_repeat (IPR001680) - T[160-189] 0.0032 - T[256-290] 3.9E-5 - T[296-333] 0.0032 - T[446-483] 1.4E-5 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[177-191] 8.2E-5 - T[278-292] 8.2E-5 - T[320-334] 8.2E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AHI1_HUMAN | 26.749 % | 90.9 | 4.97E-19 |
| WDR5B_HUMAN | 28.571 % | 81.3 | 1.11E-16 |
| WDR44_HUMAN | 54.224 % | 528 | 3.67E-179 |