- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g27746.01.t
Possible name(s)
ITGA10; ITGA11; ITGA9
Gene model
Location
chrUn [181,508,381 / 181,509,838]
Amino acid sequence
Length: 223
>Boschl.CG.Botznik2013.chrUn.g27746.01.p
MTTSRKSDYCSRVAYKSHLISPTGQSATQDDQTAASSVNNRQLGSSITSLEDGSLHVGAV
GMYLDSGSMMRFQVDKDSSPDVSSYRTIETALPGLTTDSYMGYASVSGYFNGRSHGQYIA
AGAPRHKMAGAVVIYKPLQNDAYVVSTFTILPPKGRDQVAAYFGGCLTSVDVSGDGREDL
FIASPLFVGENNDEGRVYVYISSGNDSVQDWVTGLHVILVNDT
Nucleotide sequence
Length: 672
>Boschl.CG.Botznik2013.chrUn.g27746.01.t
TGACCACTTCACGGAAATCTGATTACTGTAGCCGAGTCGCGTATAAGAGTCATCTTATCT
CACCTACAGGACAATCGGCCACACAGGACGACCAAACCGCGGCCAGTTCAGTCAATAATC
GCCAGCTCGGATCGTCCATAACGTCGTTGGAGGATGGTTCACTTCACGTCGGCGCAGTTG
GAATGTATCTTGATAGCGGGAGCATGATGAGATTTCAGGTTGACAAAGATTCGTCACCGG
ACGTGTCAAGCTATAGAACGATCGAAACTGCGTTGCCGGGATTGACAACGGATTCGTATA
TGGGTTACGCCTCGGTGTCGGGGTACTTTAACGGCAGATCGCACGGGCAATATATTGCAG
CCGGAGCACCAAGACATAAAATGGCCGGCGCCGTTGTCATTTACAAGCCATTGCAAAATG
ATGCGTACGTGGTTAGCACGTTTACGATCTTACCTCCCAAAGGGCGTGACCAAGTGGCAG
CATATTTTGGCGGCTGCTTAACGAGTGTCGATGTTAGCGGAGATGGACGCGAAGATTTAT
TTATCGCATCCCCCCTATTCGTCGGAGAAAACAACGACGAAGGACGGGTGTATGTTTACA
TCTCAAGCGGGAACGATTCAGTTCAAGATTGGGTAACGGGCCTTCATGTTATTCTCGTCA
ATGATACCTAAT
| Gene3D |
Integrin_alpha_N (IPR028994) - T[6-220] 5.7E-30 |
| ProSiteProfiles |
Int_alpha_beta-p (IPR013519) - T[29-81] 7.142 - T[87-144] 7.509 - T[149-209] 9.935 |
| SMART |
Int_alpha_beta-p (IPR013519) - T[97-151] 4.1 - T[159-216] 2.0E-4 |
| PRINTS |
Integrin_alpha (IPR000413) - T[98-110] 1.1E-6 - T[156-176] 1.1E-6 |
| Pfam |
FG-GAP (IPR013517) - T[167-200] 3.9E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|
