- Clone 'AHC0AAA26YI06' >
- Transcript 'Cisavi.CG.ENS81.R48....' >
- Transcript 'Moocul.CG.ELv1_2.S72...' >
- EST 'AHC0AAA220YJ03_RM1' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g27348.02.t
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
chrUn [178,875,304 / 178,876,897]
Amino acid sequence
Length: 1,329
>Boschl.CG.Botznik2013.chrUn.g27348.02.p
MAQNPDLSTAILKEKVKPNRLIVEETSNDDNSVVVLSQEKMDELQLFRGDTVLLKGKKRK
ETVCIALADENVANEKLCINRCVRNNLRVRLGDVVSVQACPNVKYGKKIHVLPIDDTIEG
ISGNVFDVYLKPYFLEAYRPIKAGDIFLVRGGMRAVEFKVMETDPPEYCIVSPDTVIFSE
GEPVKRADEEEALNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGIKPPRGILLYG
PPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDE
LDSIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVIIGATNRPNSIDAALRRFGRFDR
EVDIGIPDSTGRLEILRIHTKNMKLADDVDLEQVANESHGHVGADLAALCSEAALQQIRG
KMDLIDLEEETIDAEVMDNLAVTMEDFRWAMAQSNPSALRETVVEVPNITWGDIGGLESV
KTELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP
EMLTMWFGESEANVREVFDKARQAAPCVLFFDELDSIAKSRGGSVGDAGGAADRVINQIL
TEMDGMSNKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDDKSRIQILKANLRKSP
VAKDVDVNYIARVTKGFSGADLTEICQRACKLAIRESIEAEIRAERERRDNADAAMDDDV
DPVPEICRKHFEEAMKYARRSVSDKDIRKYEMFAQTLQQSRGFGGFKFPGGQQSGGNSQS
GASGSGDPFQDNEDDDLYDMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDSIAPKREK
THGEVERRIVSQLLTLMDGLKQRAHVVIIGATNRPNSIDAALRRFGRFDREVDIGIPDST
GRLEILRIHTKNMKLADDVDLEQVANESHGHVGADLAALCSEAALQQIRGKMDLIDLEEE
TIDAEVMDNLAVTMEDFRWAMAQSNPSALRETVVEVPNITWGDIGGLESVKTELQELVQY
PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEMLTMWFGES
EANVREVFDKARQAAPCVLFFDELDSIAKSRGGSVGDAGGAADRVINQILTEMDGMSNKK
NVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDDKSRIQILKANLRKSPVAKDVDVNYI
ARVTKGFSGADLTEICQRACKLAIRESIEAEIRAERERRDNADAAMDDDVDPVPEICRKH
FEEAMKYARRSVSDKDIRKYEMFAQTLQQSRGFGGFKFPGGQQSGGNSQSGASGSGDPFQ
DNEDDDLYD
Nucleotide sequence
Length: 1,593
>Boschl.CG.Botznik2013.chrUn.g27348.02.t
TGAGTAAGCTTGCAGGCGAGAGCGAGTCTAACTTGAGAAAAGCTTTTGAGGAGGCTGAGA
AGAACGCGCCCGCCATCATTTTCATCGATGAGTTAGACTCGATTGCTCCGAAGAGAGAGA
AAACTCACGGCGAAGTAGAGAGGAGGATTGTGTCGCAGCTGTTGACTTTGATGGATGGCC
TGAAGCAGAGGGCACATGTCGTTATCATTGGAGCCACGAACAGGCCAAATTCAATCGATG
CCGCGTTGAGACGTTTCGGACGTTTTGACAGGGAAGTCGACATAGGCATTCCCGATTCCA
CTGGGAGACTTGAAATTCTGAGAATCCACACCAAAAATATGAAGCTAGCTGACGACGTAG
ATTTGGAGCAAGTCGCGAATGAGTCTCACGGTCATGTTGGTGCTGATCTGGCCGCGTTGT
GTTCCGAAGCTGCTCTACAGCAAATCCGAGGCAAGATGGATCTTATTGACTTGGAGGAGG
AGACTATCGATGCAGAAGTGATGGATAATCTGGCTGTCACGATGGAAGACTTTAGATGGG
CGATGGCGCAAAGTAACCCGTCCGCTTTGCGCGAGACTGTGGTTGAAGTGCCGAATATCA
CATGGGGCGATATTGGCGGTTTGGAAAGTGTCAAAACCGAGCTGCAAGAGCTGGTTCAGT
ATCCGGTGGAGCATCCGGATAAGTTCTTGAAATTCGGCATGACTCCATCAAAAGGCGTGC
TGTTTTACGGCCCTCCGGGTTGCGGTAAAACGCTGCTGGCGAAAGCCATCGCAAACGAGT
GCCAGGCTAATTTCATCTCCATCAAGGGTCCCGAGATGTTGACTATGTGGTTTGGAGAGT
CCGAAGCTAACGTGAGAGAGGTTTTCGATAAAGCGAGACAGGCTGCTCCGTGTGTCTTGT
TCTTTGACGAGTTGGACTCGATCGCAAAGTCCCGTGGTGGTAGCGTGGGTGACGCAGGTG
GTGCCGCAGATAGAGTTATCAACCAAATCCTGACTGAGATGGACGGGATGAGCAATAAGA
AGAATGTGTTCATCATCGGAGCTACGAACAGGCCTGACATTATCGATTCTGCTATCCTGC
GTCCTGGGCGTCTCGATCAGCTTATTTACATCCCTTTGCCTGACGACAAGTCCCGCATTC
AAATCTTGAAAGCAAACCTACGCAAATCTCCCGTAGCGAAAGACGTGGATGTCAATTACA
TTGCACGAGTGACGAAAGGCTTCAGCGGCGCTGATCTTACTGAAATTTGTCAACGTGCTT
GCAAGCTCGCTATTCGAGAGAGCATCGAAGCTGAGATCCGTGCGGAACGCGAAAGGAGAG
ACAACGCGGATGCCGCTATGGATGACGACGTTGATCCTGTGCCTGAAATCTGCAGGAAGC
ATTTCGAAGAAGCTATGAAATATGCGCGCAGGTCCGTCTCCGACAAGGACATCAGGAAGT
ACGAAATGTTCGCTCAAACTCTTCAGCAAAGCCGAGGTTTCGGTGGGTTCAAATTCCCCG
GGGGCCAACAGTCTGGAGGCAACTCTCAAAGCGGAGCGTCGGGCAGCGGCGACCCCTTCC
AAGATAACGAAGATGACGATTTATACGATTAAA
| SUPERFAMILY |
Asp_de-COase-like_dom_sf (IPR009010) - T[17-100] 3.85E-25 |
| Pfam |
CDC4_N-term_subdom (IPR003338) - T[20-101] 5.9E-18 |
| SMART |
CDC4_N-term_subdom (IPR003338) - T[20-103] 5.6E-24 |
| TIGRFAM |
AAA_ATPase_CDC48 (IPR005938) - T[31-758] 1.5E-252 |
| SUPERFAMILY |
CDC48_domain_2-like_sf (IPR029067) - T[102-192] 9.81E-31 |
| SMART |
Cdc48_dom2 (IPR004201) - T[120-186] 6.7E-11 |
| Pfam |
Cdc48_dom2 (IPR004201) - T[121-185] 6.1E-10 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[195-457] 1.64E-64 - T[467-756] 6.05E-75 - T[799-987] 7.39E-37 - T[997-1286] 6.05E-75 |
| SMART |
AAA+_ATPase (IPR003593) - T[232-368] 3.1E-24 - T[505-644] 1.8E-24 - T[678-898] 3.8E-4 - T[1035-1174] 1.8E-24 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[236-365] 1.2E-46 - T[509-642] 3.3E-46 - T[801-895] 3.3E-28 - T[1039-1172] 3.3E-46 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[336-354] . - T[612-630] . - T[866-884] . - T[1142-1160] . |
| Pfam |
Vps4_C (IPR015415) - T[723-755] 1.6E-5 - T[1253-1285] 1.6E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 48.421 % | 563 | 0 |
| TERA_HUMAN | 84.403 % | 1342 | 0 |
| NVL_HUMAN | 42.649 % | 482 | 9.75E-153 |