Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Mooccu.CG.ELv1_2.S51...' > 
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g26931.01.t

Possible name(s)

KHDRBS2; QKI; SF1

Gene model

Boschl.CG.Botznik2013.chrUn.g26931

Location

chrUn [175,849,832 / 175,851,490]

Sequences

Amino acid sequence

Length: 141

>Boschl.CG.Botznik2013.chrUn.g26931.01.p
MFVNVFDLFRRPPIQRISEQINIPADLNPSINFVGLLIGPRGNTLKKIEKESNCKIMIRG
KGSVKEGKIGRKDGMPLPGEDEPLHALITGTKIEDVQKATAEINRIIKQGIEQPEGQNDL
RKNQLMELARLNGTLRDDQMP

Nucleotide sequence

Length: 425

>Boschl.CG.Botznik2013.chrUn.g26931.01.t
GATGTTTGTGAACGTTTTCGATTTATTTCGTAGGCCTCCGATTCAAAGAATCAGCGAGCA
GATCAACATACCGGCCGACTTGAACCCCAGCATCAATTTCGTCGGTCTTCTCATCGGTCC
GAGAGGAAACACGTTGAAGAAAATTGAGAAAGAGAGTAACTGCAAAATCATGATCAGAGG
AAAAGGATCGGTGAAGGAAGGGAAAATCGGCAGGAAGGACGGAATGCCTCTTCCCGGGGA
AGACGAGCCGTTACATGCTCTGATAACGGGCACGAAAATAGAAGACGTACAGAAAGCGAC
TGCCGAAATCAACAGGATTATCAAACAGGGAATTGAACAACCAGAAGGGCAAAACGACTT
GCGGAAGAACCAGCTCATGGAATTGGCGCGGTTGAACGGGACTCTCAGAGACGACCAAAT
GCCAC

InterProScan

Gene3D
KH_dom_type_1_sf (IPR036612) - T[7-140] 8.8E-47
PANTHER
BBP/SF1 (IPR031150) - T[11-139] 1.2E-64
SMART
KH_dom (IPR004087) - T[15-108] 6.8E-13
SUPERFAMILY
KH_dom_type_1_sf (IPR036612) - T[17-140] 1.82E-27
Pfam
KH_dom_type_1 (IPR004088) - T[19-104] 1.4E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SF01_HUMAN 71.875 % 186 9.8E-57
QKI_HUMAN 41.481 % 92.8 2.32E-23