Aniseed - Transcript Card

Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g25928.01.t

Possible name(s)

RETSAT

Gene model

Boschl.CG.Botznik2013.chrUn.g25928

Location

chrUn [169,730,299 / 169,737,954]

Sequences

Amino acid sequence

Length: 424

>Boschl.CG.Botznik2013.chrUn.g25928.01.p
MEFMRLLKKCSKSMLGYMMLKFLPKPVIKLMITLRLYKFWSFGFDEGAQHTLKDVVDRLT
DNKELKAVLCYCFGDYGTVPSQVPFFMHALLLNHFYRECYYPRGGASELAFNMIPGIQRN
GGAVLVRAPVSRIIVKDGRAVGVTVKKGESEYDIYAPQIVSNAGAYNTYGRLLPQDLSGK
LGLNKFQKKIGHGMSCLQVLVGLKGTTEELGLIKRNYWVFKSNEPERDMLDYLALSREDA
ANSDLPILFVSFPSTKDSTWKDRHPGKSVCVIVTFSNWEWFQEWNEDRVMKRGRVYEDLK
RTFQDRVWNQVVGLFPQLEGKVEYIDTGTPITHSHYIASPKGEIYGADHTMDRFAHDMSI
DLRPKTEVPGLFLTGQDILVCGIIPAAFSGVVAASQVLGRNLMKDLMTFSGKMRKAMHKN
KKQE

Nucleotide sequence

Length: 1,275

>Boschl.CG.Botznik2013.chrUn.g25928.01.t
TGGAATTCATGAGACTGCTTAAGGAATGCTCAAAGTCGATGCTGGGATATATGATGCTCA
AATTTCTCCCGAAACCTGTCATCAAGTTAATGATTACGCTTAGACTGTACAAATTTTGGA
GCTTTGGGTTTGACGAGGGTGCGCAACATACCCTGAAAGATGTGGTTGATCGATTGACTG
ATAATAAGGAGCTTAAAGCAGTGTTGTGTTACTGCTTTGGAGACTATGGAACCGTGCCGT
CGCAAGTTCCATTTTTCATGCACGCTCTGTTGCTGAACCATTTCTACCGCGAATGTTATT
ATCCTCGAGGAGGGGCCAGTGAGCTGGCATTCAACATGATACCAGGAATACAGCGAAACG
GCGGCGCGGTGCTCGTTCGTGCGCCTGTCTCACGGATTATTGTAAAAGATGGGAGAGCCG
TTGGGGTAACAGTGAAGAAAGGGGAGTCCGAGTATGATATTTACGCACCGCAAATTGTAT
CAAACGCTGGTGCCTACAACACATACGGCAGATTGCTGCCACAAGATCTATCTGGCAAGC
TGGGACTCAACAAGTTCCAAAAAAAGATAGGGCACGGAATGAGCTGTCTTCAAGTGCTCG
TTGGATTGAAAGGCACCACAGAGGAGCTCGGCTTGATAAAAAGGAATTACTGGGTGTTCA
AATCCAATGAACCAGAGAGGGATATGCTGGACTATCTGGCACTATCGAGAGAAGACGCGG
CGAATTCCGACCTTCCTATTTTGTTTGTTTCATTCCCTTCGACCAAAGATTCGACGTGGA
AAGACAGGCACCCGGGTAAGTCTGTCTGCGTCATCGTGACATTCTCGAACTGGGAGTGGT
TTCAAGAATGGAACGAGGACCGCGTCATGAAGCGAGGCCGCGTTTACGAAGACCTCAAGC
GTACCTTCCAGGACAGGGTTTGGAATCAGGTCGTCGGCCTCTTTCCTCAGCTGGAGGGAA
AGGTGGAGTACATCGATACCGGAACGCCCATCACTCACTCGCACTACATCGCATCACCAA
AGGGCGAGATTTACGGCGCGGATCACACCATGGATCGCTTTGCCCATGACATGTCGATAG
ACTTGCGCCCGAAGACCGAGGTACCGGGTTTATTCCTTACAGGTCAAGACATCTTGGTGT
GCGGCATTATACCGGCAGCGTTCAGCGGAGTCGTCGCGGCATCGCAGGTGTTGGGCCGGA
ATTTAATGAAAGACCTGATGACGTTCTCGGGAAAGATGCGGAAGGCGATGCATAAGAATA
AGAAGCAGGAATAAT

InterProScan

SUPERFAMILY	FAD/NAD-bd_sf (IPR036188) - T[34-177] 5.66E-22 - T[346-388] 5.66E-22
Gene3D	FAD/NAD-bd_sf (IPR036188) - T[44-201] 1.0E-13
Pfam	GMC_OxRdtase_N (IPR000172) - T[115-168] 2.4E-4

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RETST_HUMAN	40.476 %	338	5.57E-111