- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g25615.01.t
Possible name(s)
TBL1XR1; TBL1Y; WDR11
Gene model
Location
chrUn [167,422,697 / 167,426,216]
Amino acid sequence
Length: 1,172
>Boschl.CG.Botznik2013.chrUn.g25615.01.p
MTQAVKGINPAIIPQRLLPGVLSPQNVIDWGWQGLIAYGNGQVVVILDPNTTQIVQTLIR
HRHPVCKLKWSCENYHHDLASPYSLRVASVDTSGRVIVWDVAQGTERTQFVERGKPVQDL
EWLQSQDASHDLLVAIHAPNILCLWNADTGTKLWNTSYDDVPEIHSITMDPFEPTRFAAL
GSNCILFVNDFSIGKRPASNGKKYYITEDKDQRRASVQPGGNLAKMAASGIKFLMGEEGI
KGNASAASSCRQLVYLPSMRHHLAVVFPTEILIIDVSILEAVSTIPLEQNGSPFMRVLPT
YQRPALVCMHENGSVSFRVKRPCRISDYILKSEDETPSAKYDLFFDTACHSEAFRITNRV
RPVDVAMCPVSERSAAVLVSDGRIFIWKVIPSYKDEKFTNAPKLYSLPKDLSTTPTKSST
LGEIISPSCHVLPVTPGLNDEIWGDQIALKYTMVGLFHSISCQVTAIRMCPALTHKNWPY
YRPLLAVGLQSGNILIYDLGTGKLMYEYGAHTCEVRGIEWSGLRSIISYGYPQGSSQSTN
ALVNNEIIATNIMTGQSMPFRGDKSAESPINMMKISNKKQYVLIIFHDQPIELWDLKTRC
LLRVLPKSFPAIHSVEWAPAHAIKKSDVTPDSDQSHFKEHIVLTDSSATLFHCIVEGSSF
KRGSRIPHVTERNSTVTSISWKHDHIFMGDTDGIVSLWNLKSKIAKSVPTHRGWIRKVQF
GPGKGNLQVGVLFDDGLEIWDADDAVVACSIRTPKQLPKVLDFDWCASDKVVLSCENGQI
LVMDSSLTLPPQNLPTSDLYYWKPISNPYLLQTKPGLALKAMLQHRMLDAESMKNDIPQW
ENVKNAMDATSEDIRDLLRDSRSTLDRCSIVAKLYGDESEVRFWEMVANCVTNSNISDVY
LDTLSTCEKFRLYELQRCFRHLMIKNNPKQAKQCVTNLVYFGEAERAIQLGLETEPTSDS
YYEDCLKSCLIATLHNNKESAQSNVKLIATNLIANDKLIEGVEILCMLGKHLDACRYLAT
NGCWDLAVWLAKIHLKNLEYEEIMVRWAKHLSSPRVNNKSKAILVYISLKKYVHVLDTLH
QMRHFDRAAMFALICQEMHLFPDDKPQELIDSVHGEYARYLRQLGCTGELVEVHEALRAD
KADSDDTVSSEASSFVMNSSGSNMTDDFENVG
Nucleotide sequence
Length: 3,519
>Boschl.CG.Botznik2013.chrUn.g25615.01.t
AATGACCCAAGCTGTGAAAGGAATCAATCCCGCCATTATCCCACAACGTCTGTTGCCTGG
GGTGTTATCCCCACAAAACGTTATCGATTGGGGGTGGCAAGGCCTGATCGCGTATGGAAA
TGGGCAAGTCGTTGTCATACTCGATCCCAACACGACGCAAATAGTTCAAACACTGATCCG
TCATCGTCACCCAGTGTGTAAACTGAAATGGTCTTGCGAAAACTATCACCACGATTTGGC
ATCACCTTACTCTTTACGTGTTGCGTCTGTGGACACAAGTGGACGGGTTATAGTTTGGGA
TGTCGCACAGGGTACTGAACGTACTCAATTCGTTGAACGTGGCAAACCAGTCCAAGATTT
GGAATGGCTACAATCTCAAGACGCGTCGCATGATCTTTTAGTGGCGATTCATGCCCCGAA
TATTCTCTGTCTTTGGAACGCGGACACCGGTACGAAATTGTGGAATACATCGTACGACGA
TGTCCCGGAGATACACTCGATCACAATGGACCCTTTCGAACCAACGCGTTTTGCTGCACT
TGGATCGAACTGTATTCTATTTGTTAACGATTTCAGCATTGGAAAACGACCGGCGTCTAA
CGGTAAAAAGTACTATATCACCGAGGACAAAGATCAACGTAGAGCTAGCGTACAGCCTGG
TGGTAATCTTGCCAAAATGGCAGCGTCTGGGATTAAATTTCTCATGGGCGAGGAAGGAAT
TAAAGGGAATGCCTCTGCAGCATCATCTTGCAGACAGCTCGTGTATTTACCGTCAATGCG
CCACCACCTGGCGGTCGTGTTTCCTACGGAAATTCTGATCATTGACGTCAGCATTTTGGA
AGCGGTTTCCACTATTCCGTTAGAGCAAAATGGATCCCCTTTCATGCGCGTTTTACCGAC
ATACCAAAGACCAGCTCTCGTTTGCATGCACGAAAACGGATCTGTGTCTTTTCGCGTGAA
AAGACCTTGCCGAATCAGCGACTATATCCTGAAATCGGAGGATGAGACGCCTTCTGCGAA
GTATGATCTGTTTTTTGACACCGCTTGTCACAGTGAGGCTTTTCGTATCACTAATCGTGT
GCGGCCTGTCGACGTTGCCATGTGTCCGGTTTCAGAGCGCAGCGCAGCTGTCCTGGTAAG
TGATGGAAGAATTTTTATTTGGAAAGTAATTCCGTCTTATAAGGATGAAAAGTTCACCAA
CGCTCCGAAACTATATTCGTTACCGAAGGATTTGTCTACCACTCCCACGAAAAGCAGTAC
TCTCGGTGAAATCATATCTCCTTCGTGCCACGTTCTGCCTGTGACACCGGGTCTAAACGA
TGAAATATGGGGCGATCAAATCGCCTTGAAGTACACCATGGTTGGCCTGTTCCACTCCAT
TTCCTGCCAAGTAACCGCGATCCGAATGTGCCCGGCATTGACCCACAAGAACTGGCCTTA
TTACCGCCCGTTGTTGGCTGTCGGACTGCAGTCTGGAAACATCCTAATTTACGATCTCGG
CACTGGAAAACTCATGTACGAATACGGGGCGCACACTTGTGAAGTTCGCGGTATCGAATG
GAGTGGGTTAAGAAGCATTATTTCGTACGGCTACCCACAGGGTAGCTCTCAAAGCACAAA
CGCACTCGTGAATAATGAGATTATCGCGACCAATATCATGACCGGGCAATCAATGCCTTT
TCGTGGTGATAAATCCGCCGAGTCTCCAATAAACATGATGAAGATATCCAACAAGAAACA
GTACGTGCTGATTATTTTCCACGATCAACCGATTGAGTTGTGGGATCTGAAGACACGGTG
CTTGCTACGCGTGCTCCCAAAAAGTTTTCCAGCCATACACTCTGTCGAATGGGCTCCTGC
GCATGCAATCAAAAAATCTGATGTCACCCCAGACAGTGATCAATCTCACTTTAAAGAACA
TATCGTCTTAACCGACTCTTCCGCAACTTTGTTTCATTGTATTGTGGAAGGCTCGTCATT
TAAGCGCGGGTCCAGAATACCACATGTCACTGAACGCAATTCAACGGTTACAAGTATATC
TTGGAAGCATGATCACATATTCATGGGTGACACGGACGGAATCGTGAGCCTCTGGAATTT
GAAATCGAAAATTGCAAAATCGGTGCCGACACACAGAGGCTGGATTAGAAAAGTACAGTT
CGGCCCAGGCAAAGGGAATCTTCAAGTAGGAGTATTGTTTGATGACGGTTTGGAAATATG
GGACGCGGACGACGCCGTGGTAGCTTGCAGTATAAGAACTCCGAAGCAGTTACCGAAGGT
GTTGGATTTCGATTGGTGCGCGTCCGATAAAGTGGTTTTGTCTTGCGAAAACGGACAGAT
TCTGGTGATGGACTCTAGCTTGACGCTGCCGCCTCAAAATCTCCCAACGTCAGACTTGTA
CTACTGGAAGCCCATTTCGAATCCGTACCTCTTACAGACCAAACCTGGCTTAGCGCTCAA
GGCCATGCTTCAGCACAGGATGTTAGACGCGGAATCAATGAAAAACGATATACCGCAGTG
GGAAAATGTTAAAAATGCAATGGATGCTACGTCGGAAGATATCAGGGATCTACTCCGAGA
TAGCCGCAGCACTCTGGATCGATGTAGTATCGTCGCTAAACTGTATGGGGATGAATCGGA
AGTGCGATTCTGGGAAATGGTCGCAAATTGCGTCACAAATTCCAACATCAGCGACGTGTA
CTTGGACACGCTTTCTACATGTGAAAAATTCAGACTTTACGAGTTGCAACGATGTTTTCG
GCACCTGATGATTAAGAACAATCCGAAACAAGCGAAGCAGTGTGTTACTAATCTTGTTTA
CTTTGGCGAGGCGGAAAGGGCGATACAGTTAGGTCTCGAAACGGAACCTACCAGCGATAG
CTATTACGAAGACTGTTTAAAATCGTGCTTGATAGCAACGTTGCATAACAACAAAGAATC
TGCCCAGAGCAACGTCAAGCTCATAGCCACTAATCTGATCGCTAACGACAAACTTATCGA
GGGTGTTGAGATACTGTGTATGCTCGGGAAGCATTTGGACGCGTGCCGATACCTGGCTAC
TAACGGATGTTGGGACCTTGCCGTGTGGCTGGCGAAAATCCATCTGAAAAATTTGGAATA
CGAAGAGATCATGGTCAGATGGGCTAAACATTTAAGCTCACCCCGTGTCAATAACAAATC
CAAAGCTATCTTGGTGTACATCTCGTTGAAGAAGTACGTTCATGTATTGGATACGCTGCA
TCAAATGCGTCATTTCGATCGTGCTGCCATGTTTGCGTTGATTTGTCAAGAAATGCATTT
GTTTCCGGACGACAAACCGCAAGAATTGATAGACTCGGTGCATGGCGAATATGCTCGCTA
TTTACGGCAGCTTGGCTGTACCGGAGAGTTGGTTGAGGTTCATGAAGCGTTGAGAGCCGA
CAAAGCTGACAGTGATGATACGGTTTCTAGCGAGGCTAGCAGTTTTGTCATGAATTCTTC
GGGAAGCAATATGACTGATGATTTCGAAAATGTGGGCTG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[23-223] 3.8E-15 - T[331-536] 5.5E-6 - T[537-798] 1.8E-15 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[39-208] 1.71E-25 - T[448-605] 1.71E-25 - T[480-525] 5.49E-17 - T[582-787] 5.49E-17 |
| SMART |
WD40_repeat (IPR001680) - T[51-100] 0.031 - T[450-498] 150.0 - T[501-540] 290.0 - T[553-595] 450.0 - T[662-699] 8.9 - T[701-741] 60.0 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[686-700] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR11_HUMAN | 38.159 % | 841 | 0 |