- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g23956.01.t
Possible name(s)
PRICKLE1; PRICKLE2; PRICKLE3
Gene model
Location
chrUn [156,218,571 / 156,226,217]
Amino acid sequence
Length: 429
>Boschl.CG.Botznik2013.chrUn.g23956.01.p
VRYCNKLTEEEERELKLFSKQRKQEALGRGSARIYSHSAPSTRCENCGSTIKGGDVAIFA
TRAGTGVCWHPNCFVCSLCKELLVDLIYFYQDGQLYCGRHHAESLKPRCSACDEIIFSDE
CTEAEGRHWHMNHFCCYDCEVVLGGQRYIMRDEKPYCTRCFEARYAEYCDTCGEMIGLDV
GQMQYDGQHWHATEDCFSCMRCNVSLLGKPFLPKHGQIFCSKACSIGDDQSVSETDSQYE
NPTLPTSHNVRHSLNLENLHDGIATGRGLPQQQKQVEIHQYGSTDEPEVFLGDNLYPAEA
LHTNSLRHKKNALARSKRKQVPTQKQDTSCNGASFGEKSPAGGSANPNFPQNTYNSTDSS
GYNSSSTIDALEHAKNLSQTAEHARHQLQKTDTLNSNSSSVSRAESMVNTDRRCSMGGHV
PASEFVPYK
Nucleotide sequence
Length: 1,287
>Boschl.CG.Botznik2013.chrUn.g23956.01.t
GGTTCGGTATTGCAATAAACTGACCGAGGAAGAGGAAAGAGAATTGAAGCTTTTTAGCAA
ACAACGAAAGCAGGAAGCGCTCGGAAGAGGTAGTGCAAGGATATACTCGCACTCCGCGCC
GTCTACGCGCTGCGAAAAGTGCGGCAGCACCATCAAAGGGGGTGACGTGGCGATATTTGC
AACGCGAGCCGGAACGGGAGTTTGCTGGCACCCTAATTGCTTTGTGTGCTCTCTGTGCAA
AGAGCTGCTAGTGGATTTGATTTATTTCTACCAGGACGGACAGCTTTATTGCGGAAGGCA
TCACGCCGAGAGTCTTAAGCCGCGATGCTCCGCGTGTGATGAGATCATTTTCTCCGACGA
ATGCACGGAAGCGGAAGGCCGCCACTGGCACATGAATCACTTCTGCTGCTACGATTGCGA
AGTCGTGCTGGGGGGTCAACGGTACATAATGCGAGACGAGAAGCCATACTGCACCCGGTG
CTTCGAAGCGAGATACGCGGAATACTGCGACACTTGCGGGGAGATGATAGGTCTCGACGT
CGGCCAAATGCAGTACGACGGACAGCACTGGCACGCCACCGAAGACTGCTTCTCGTGTAT
GAGATGCAACGTGTCGCTGTTGGGAAAACCTTTCCTCCCCAAGCACGGGCAGATATTTTG
CTCCAAAGCGTGCAGCATCGGCGACGACCAGTCCGTTTCCGAAACCGACTCCCAGTACGA
AAATCCGACGCTGCCCACTTCTCACAACGTACGGCACAGTCTCAACTTGGAAAATCTACA
CGACGGTATCGCTACGGGCCGCGGATTACCTCAGCAGCAGAAGCAAGTCGAGATTCACCA
GTACGGATCTACTGACGAGCCAGAAGTGTTTCTAGGCGATAACCTGTACCCGGCTGAGGC
TCTGCATACGAATAGTCTGCGCCACAAAAAAAACGCTTTAGCTAGGAGTAAGCGGAAGCA
AGTTCCGACGCAGAAACAAGATACATCCTGCAACGGCGCGAGCTTCGGCGAGAAATCGCC
GGCCGGCGGCTCCGCCAACCCGAATTTCCCGCAGAACACTTACAACAGCACCGACAGTAG
TGGGTACAACAGCAGCAGCACCATAGACGCGCTGGAACACGCGAAAAACCTGTCTCAAAC
GGCGGAACACGCGCGCCACCAATTACAAAAAACCGACACCCTCAACAGTAACAGCAGCAG
CGTCAGCAGAGCTGAGAGCATGGTCAATACAGACAGACGTTGCTCGATGGGCGGTCACGT
GCCAGCGTCTGAATTCGTGCCGTACAA
| ProSiteProfiles |
PET_domain (IPR010442) - T[1-39] 12.954 |
| Pfam |
PET_domain (IPR010442) - T[1-31] 1.8E-7 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[42-106] 10.524 - T[107-167] 13.088 - T[168-231] 6.792 |
| SMART |
Znf_LIM (IPR001781) - T[43-100] 1.5E-10 - T[108-160] 9.0E-16 - T[168-223] 1.3E-7 |
| CDD |
LIM1_prickle (IPR033725) - T[44-102] 1.59318E-35 |
| Pfam |
Znf_LIM (IPR001781) - T[44-103] 8.8E-12 - T[109-164] 3.2E-11 - T[169-222] 8.0E-6 |
| CDD |
LIM2_prickle (IPR033726) - T[107-162] 1.13217E-34 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[109-143] . |
| CDD |
LIM3_prickle (IPR033727) - T[167-225] 1.06416E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 69.835 % | 387 | 5.24E-127 |
| PRIC1_HUMAN | 68.465 % | 375 | 9.4E-123 |
| PRIC3_HUMAN | 64.655 % | 335 | 1.58E-109 |
