- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g23883.01.t
Possible name(s)
DEPDC1; DEPDC1B
Gene model
Location
chrUn [155,731,040 / 155,735,522]
Amino acid sequence
Length: 368
>Boschl.CG.Botznik2013.chrUn.g23883.01.p
MQCKRHRRHFKAYNQCFSAAEATDFLHEVLKRNPNLGEDVTRRQTVQLLGKFLQNHVIED
VQGRWGSENFECDGKLYRFPPIENTEDSVRRPLATIDENVSINQTINNNHKKDSGKRKRS
QAYPFPDLRTDSQENESSTTECERLKRPLPPVSAIPKCRVISPKITEDDINDTWKKVILE
RMREGLQLESLCGVIMEDKIQGNFVRHNATRVGRSGVVQVEKEEDIPYWALSAMTCLANW
PNSTDTGLPCYPGFERDIFKAVCDYFKGLEPVSILQYGTAKKRTGNCKPVSIIQSQEPLL
TYDCYELFTNAICLIQGETQQEAIKALRYALLILPPVNRRKLHLLTRLLAKMCKNSHLEK
IGGRVDVR
Nucleotide sequence
Length: 1,107
>Boschl.CG.Botznik2013.chrUn.g23883.01.t
TGCAATGCAAGAGACACCGGAGACATTTTAAAGCTTATAACCAGTGCTTTTCTGCGGCAG
AAGCAACTGATTTTTTACACGAAGTACTAAAACGAAATCCGAATTTGGGCGAGGATGTCA
CCAGACGACAGGCAGTGCAACTGCTTGGCAAATTTCTTCAAAATCACGTTATAGAAGACG
TACAAGGTCGATGGGGCAGCGAAAATTTTGAATGTGATGGGAAGCTTTACAGGTTTCCGC
CCATCGAAAACACGGAGGACAGCGTCAGACGGCCGCTGGCGACAATCGACGAGAATGTGT
CAATAAATCAAACCATCAACAACAATCACAAGAAGGACAGCGGCAAACGGAAGCGATCTC
AAGCTTACCCGTTTCCCGATTTGCGAACTGATTCACAAGAAAATGAATCGTCAACTACCG
GATGTGAACGTTTGAAACGGCCTTTGCCCCCGGTGTCGGCCATTCCGAAGTGTCGAGTGA
TATCTCCGAAAATTACAGAGGATGACATCAACGATACGTGGAAGAAGGTCATCCTGGAGA
GAATGAGGGAAGGATTGCAGCTCGAATCGCTGTGCGGCGTGATCATGGAAGATAAAATCC
AAGGGAATTTCGTCCGACACAACGCAACGCGCGTGGGGAGATCCGGGGTCGTGCAAGTTG
AAAAAGAGGAGGATATTCCGTACTGGGCACTGAGCGCGATGACGTGCTTGGCGAACTGGC
CCAACAGCACAGACACGGGGCTGCCGTGTTATCCGGGATTTGAGAGAGACATTTTCAAAG
CCGTGTGCGACTACTTCAAGGGCCTCGAGCCCGTGTCGATTTTGCAGTACGGAACTGCGA
AAAAACGCACCGGCAACTGCAAGCCTGTCTCGATAATCCAATCGCAGGAGCCCTTGCTCA
CGTACGACTGTTACGAGCTGTTCACGAACGCGATTTGCTTGATACAAGGCGAAACGCAGC
AGGAGGCCATCAAAGCCTTGCGCTACGCGTTGCTAATCCTGCCGCCGGTCAACAGAAGAA
AGCTGCATTTGCTTACTAGGCTGTTGGCGAAAATGTGCAAGAATTCGCACCTCGAGAAAA
TCGGAGGGCGAGTTGACGTGAGGTAAG
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[1-81] 2.1E-22 |
| SMART |
DEP_dom (IPR000591) - T[1-81] 1.2E-7 |
| Pfam |
DEP_dom (IPR000591) - T[2-79] 4.6E-13 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[3-101] 1.31E-13 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[294-362] 5.9E-9 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[296-360] 1.59E-9 |
| Pfam |
RhoGAP_dom (IPR000198) - T[296-360] 1.1E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DEP1B_HUMAN | 34.574 % | 231 | 2.43E-71 |
| DEP1A_HUMAN | 35.647 % | 197 | 7.01E-57 |
