- Transcript 'Cisavi.CG.ENS81.R49....' >
- EST 'AHC0AAA129YG12_RM1' >
- Transcript 'Mooccu.CG.ELv1_2.S22...' >
- Transcript 'Cisavi.CG.ENS81.R49....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g22481.01.t
Possible name(s)
IGFALS; LRIG2; LRRC15
Gene model
Location
chrUn [146,739,615 / 146,745,343]
Amino acid sequence
Length: 393
>Boschl.CG.Botznik2013.chrUn.g22481.01.p
MICDRVLHVVIFLIATTSSTDTDRKCRRYEMTSSPVKKSAGGTDRVMVRCDGRKLTQLTS
AFLYETLVGPPTPVEVQADFEVGTGILHDQPRTTSAEPIYQLNLQNADLETIQDGVFRTV
PTLEVLNLRMNRVKEIGKRTFEGLLGLKDLNLGRNEIATVEPFSFSQQNELVYLTLAENH
LEELSYFTFRGLTRSQYLNLELNNITALRAGTFAAMPNLENLRLSLNRIRKLDGGMLAGL
YRLKHLYFTSNNLERILDGAFRSNKRLESLDLSGNQLTTINSATFDGLKSLRRLSLSNNK
IVHIDDVAFQKMPLLRELDLSHNEMKTLSRGMFMGLVNLNYFYAESNQLGDTGSLSKETD
SYQRLTEALSLLCRKRGMHFVNLRNNGLLTYLK
Nucleotide sequence
Length: 1,179
>Boschl.CG.Botznik2013.chrUn.g22481.01.t
AATGATCTGCGACAGAGTATTGCACGTGGTCATATTTTTGATTGCAACAACATCGTCAAC
GGATACAGATAGGAAATGTAGACGGTACGAAATGACTTCGTCTCCCGTCAAAAAGTCGGC
TGGTGGTACAGACAGAGTGATGGTTCGCTGCGACGGACGCAAATTGACGCAACTAACATC
TGCCTTCCTTTACGAGACATTGGTTGGTCCGCCAACGCCAGTGGAAGTGCAAGCAGATTT
TGAGGTCGGGACTGGTATATTACACGATCAGCCACGCACTACATCTGCCGAACCGATCTA
CCAGCTCAATTTACAAAACGCAGATTTGGAAACGATTCAAGATGGTGTCTTTCGTACAGT
ACCTACGTTAGAGGTGTTAAATCTAAGAATGAACAGAGTGAAGGAAATAGGGAAGCGCAC
ATTTGAAGGACTACTCGGTCTGAAAGACTTAAACCTGGGGCGAAATGAAATTGCAACAGT
CGAGCCATTCTCGTTTTCCCAGCAAAACGAGCTTGTCTATTTGACATTAGCGGAGAACCA
CTTAGAAGAATTGAGTTATTTCACTTTCAGAGGCCTCACCAGGTCACAATATCTGAATTT
GGAGTTGAACAACATCACCGCGTTGCGTGCCGGTACCTTTGCGGCTATGCCAAATTTGGA
AAACTTGCGTCTCTCGCTGAACAGGATTAGAAAATTGGACGGAGGAATGCTCGCAGGACT
TTATCGCTTGAAGCACCTGTATTTCACTTCGAATAACTTGGAGCGTATTTTGGACGGCGC
ATTTCGATCGAACAAAAGATTAGAATCCTTGGATTTATCGGGAAACCAGTTAACGACAAT
CAACTCAGCTACTTTCGATGGCCTGAAAAGTTTGCGTCGTCTATCACTCAGTAATAATAA
AATCGTTCACATTGATGACGTAGCCTTTCAAAAGATGCCTTTATTACGGGAGTTGGATCT
TTCTCATAATGAAATGAAAACATTATCAAGAGGTATGTTTATGGGTTTGGTGAACTTGAA
CTATTTTTATGCGGAATCGAATCAACTTGGCGATACAGGATCGCTCTCTAAAGAAACCGA
TTCATATCAGCGCTTGACTGAAGCATTGTCACTTCTCTGTAGAAAACGTGGGATGCATTT
TGTTAATCTTCGCAACAACGGCCTGTTGACATATTTGAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[43-221] 1.2E-25 - T[222-387] 2.0E-36 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[100-157] 2.1E-10 - T[197-253] 3.7E-12 - T[266-288] 0.08 - T[290-349] 2.4E-17 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[120-143] 13.0 - T[144-167] 8.0 - T[170-191] 140.0 - T[192-215] 23.0 - T[216-239] 0.68 - T[240-263] 0.36 - T[265-287] 1.6 - T[288-311] 0.0013 - T[312-335] 0.02 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[122-143] 5.902 - T[146-167] 6.942 - T[170-191] 6.064 - T[218-239] 6.772 - T[242-263] 5.972 - T[266-287] 7.458 - T[290-311] 8.698 - T[314-335] 6.503 - T[338-359] 5.125 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ALS_HUMAN | 32.016 % | 112 | 7.32E-27 |
| LRC15_HUMAN | 33.613 % | 108 | 7.94E-26 |
| LRIG2_HUMAN | 32.812 % | 118 | 6.92E-29 |