Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g22230.01.t

Possible name(s)

ACAP1; PLEKHA5; TRIOBP

Gene model

Boschl.CG.Botznik2013.chrUn.g22230

Location

chrUn [144,989,519 / 145,000,950]

Sequences

Amino acid sequence

Length: 522

>Boschl.CG.Botznik2013.chrUn.g22230.01.p
PRETHLLLDKDLNKATPIYVGWLLFAPIGTDFSNPTHRTRKWQRRYFILFEHGALRYALD
DNANTLPQGTINMNQCTDVVHAETETGQKYSLCIYHPEMKYFIRTESRDDTTGWYEKLVV
FPQTIKQEAINRRRFPRRYGSAKAPSTTSSELNKTPSAVTYDALRSPKSETPPRDNIIPT
PSESQVERKPSDLKRGRSISRKSTDKKQGTQTPDVQRPVRRAKSLDRHSHDLNDFTVDGT
SQRRGWIMKRRNAAKETWTKHWFVMSEDALKYYKDPSSEEFSEADGKIKLDDIVRVGKVD
LNENYGFSIYTVNEEITLAAVTSRIRQGWINTIENSSKLVNEKENSEKIVPEKAPEVFDE
RMVEKSMERRAKKRLRRKMGRSRTYDFAELRSAARRTVDMNPDEKTDSTTKELKDELDTL
LMAEIAKSKQENVRQNGLDSPDGSKKAQVSPRTPKQASTANENSKYKPPLTQKVEFMAKQ
IELGKKVMGDVLSEQKEKVGCYFRKSELRFDYCILPNIFLRP

Nucleotide sequence

Length: 1,571

>Boschl.CG.Botznik2013.chrUn.g22230.01.t
GCCCCGGGAGACCCATCTACTTTTGGACAAGGATTTGAATAAGGCAACTCCAATTTATGT
GGGATGGCTCCTTTTCGCCCCGATCGGAACTGATTTTAGTAATCCCACCCACCGAACACG
GGAATGGCAAAGACGATACTTTATCTTGTTCGAACATGGAGCACTCCGCTACGCACTTGA
CGATAATGCCAACACCCTACCTCAAGGCACCATCAACATGAATCAATGTACCGACGTGGT
GCATGCTGAAACGGAGACCGGACAGAAGTACTCGCTTTGTATTTATCATCCGGAGATGAA
ATATTTTATTCGTACGGAAAGCAGAGATGACACCACAGGGTGGTATGAGAAGCTTGTCGT
GTTCCCCCAAACGATTAAACAAGAGGCAATCAACAGACGAAGGTTTCCTCGTAGGTATGG
AAGTGCAAAGGCTCCATCCACCACTGGTTCTGAATTGAACAAAACGCCAAGTGCCGTGAC
CTACGACGCTCTGAGAAGTCCAAAATCCGAAACGCCCCCTCGGGATAATATTATCCCAAC
TCCGTCCGAGTCCCAAGTCGAACGGAAGCCGTCGGACTTGAAACGAGGGCGGAGCATCTC
TAGAAAATCTACTGACAAAAAACAAGGCACCCAAACTCCCGACGTGCAGCGTCCAGTGCG
CCGAGCTAAATCACTAGATCGCCACTCGCATGATTTGAATGATTTCACCGTGGATGGCAC
CAGTCAAAGGCGAGGATGGATTATGAAACGTAGAAATGCCGCCAAGGAAACGTGGACGAA
GCACTGGTTTGTGATGTCGGAAGACGCGCTCAAATACTACAAGGACCCCAGTTCTGAGGA
GGTCAGCGAGGCAGACGGGAAAATTAAGCTGGACGATATCGTACGTGTCGGTAAAGTGGA
TTTGAACGAAAATTACGGATTCTCTATCTACGCTGTAAACGAAGAAATTACATTGGCCGC
TGTGACATCGCGGATCAGGCAAGGTTGGATTAACACGATCGAAAATTCGTCGAAACTGGT
GAACGAGAAAGAAAACAGTGAAAAAATCGTGCCCGAAAAGGCTCCGGAGGTGTTCGACGA
GCGTATGGTCGAAAAATCGATGGAACGCAGAGCGAAAAAGCGGTTGCGACGGAAAATGGG
CAGATCGCGTACCTACGATTTTGCAGAATTGAGGTCTGCCGCGCGTCGTACCGTGGATAT
GAATCCAGACGAGAAAACGGATTCAACAACAAAAGAACTGAAAGATGAATTAGACACTTT
GCTAATGGCGGAAATAGCGAAATCGGAACAAGAGAACGTAAGGCAAAACGGATTAGATTC
GCCGGACGGCTCTAAAAAAGCACAGGTTTCACCCAGAACTCCAAAACAAGCTTCTACTGC
TAACGAAAACTCAAAGTACAAACCGCCTCTGACGCAAAAAGTGGAGTTTATGGCGAAACA
GATCGAGCTGGGTAAGAAAGTGATGGGCGACGTCTTGTCGGAGCAAAAAGAGAAGGTGGG
TTGCTATTTTCGCAAGTCTGAGTTAAGATTTGACTATTGCATTTTACCGAACATATTTCT
TCGACCATAGG

InterProScan

Gene3D	PH-like_dom_sf (IPR011993) - T[10-131] 4.5E-15 - T[236-376] 1.2E-17
ProSiteProfiles	PH_domain (IPR001849) - T[16-123] 9.987 - T[240-338] 14.618
SMART	PH_domain (IPR001849) - T[17-125] 6.1E-9 - T[241-340] 4.7E-15
Pfam	PH_domain (IPR001849) - T[21-118] 5.1E-9 - T[242-337] 5.6E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MPRIP_HUMAN	66.935 %	197	2.71E-54
TARA_HUMAN	44.737 %	82.4	2.32E-16