- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g21922.01.t
Possible name(s)
AGTR1; APLNR; SSTR1
Gene model
Location
chrUn [142,844,308 / 142,845,754]
Amino acid sequence
Length: 481
>Boschl.CG.Botznik2013.chrUn.g21922.01.p
MDNATATGITAAKWSDALNEKAIAVTFIGIFIVGLIGNSVVIYILFRKRRSWNITTTYLF
NLSVADAIFVCTLPLWAQTYLSRMEWKFGVFLCKFVGTVTSLNMYASIFFLTAMSVDRWI
AVVHATTINTTRSSVVARTMCVVVWMLAFLVSIPRLLFTDARPEKSDTNSTTVSYNMSSP
PPPEIVYRCGYMLPPPNKRMLMGLSEFMQAAFGFAIPMIIICACYLCIVRTVRKKLISKR
VKKERVAILAGIIITAFFVCWVPLQLVTLYSALAGWWRMFPFDENWYWKLHPAFVCLAYA
NSCINPFIYAFTATNFKKNVKEVCGSNMNRCTEVGTYKMTLPKRDTMSPLSPKRTKDLDT
KTPFLKSSPACKTDKNSTEKRISGESSSDDIYEHFQPQGRDHKGDIGARGPPECQHLAVQ
DTTSGIYYEYFSSPPVLCRQPDQSRKCARRSDVVNHNDQPEISSVLGRENSIQEESNETE
V
Nucleotide sequence
Length: 1,446
>Boschl.CG.Botznik2013.chrUn.g21922.01.t
TGGATAACGCTACCGCGACTGGCATAACGGCGGCAAAGTGGTCCGATGCTCTGAACGAAA
AAGCTATCGCGGTCACCTTCATCGGAATATTCATCGTCGGACTTATCGGAAACTCGGTGG
TGATCTATATCTTATTCCGCAAAAGGAGGTCATGGAATATCACAACCACGTACCTCTTTA
ACTTGTCCGTGGCGGACGCTATTTTCGTATGCACGCTTCCGCTGTGGGCTCAGACTTACC
TAAGCCGGATGGAATGGAAGTTTGGTGTTTTCCTCTGCAAATTTGTAGGCACGGTCACGT
CGTTGAACATGTATGCGAGTATATTCTTTCTGACGGCTATGAGCGTTGATAGATGGATCG
CAGTTGTTCACGCTACTACCATCAATACAACCAGGAGCTCGGTTGTCGCTAGAACTATGT
GCGTAGTGGTGTGGATGCTTGCTTTCCTGGTTTCTATTCCGCGGTTGCTCTTCACTGACG
CTCGCCCAGAAAAGTCCGACACGAACAGCACCACTGTTAGTTACAATATGTCATCGCCGC
CGCCACCCGAAATAGTTTATAGGTGCGGTTATATGTTGCCACCGCCTAACAAGAGAATGC
TAATGGGCCTGTCTGAGTTTATGCAGGCCGCGTTTGGATTCGCGATACCGATGATTATCA
TATGCGCATGCTACCTATGCATCGTCCGCACCGTCCGCAAAAAGCTGATCAGCAAGCGGG
TGAAAAAAGAGCGAGTGGCTATACTAGCAGGGATAATAATCACTGCGTTTTTCGTGTGCT
GGGTGCCCTTGCAGCTGGTGACGCTGTACTCGGCCCTGGCGGGATGGTGGCGCATGTTCC
CTTTCGATGAAAATTGGTACTGGAAGCTCCACCCTGCGTTTGTGTGTCTGGCCTACGCTA
ATAGCTGTATCAACCCGTTTATTTACGCGTTTACGGCCACCAATTTCAAAAAGAACGTGA
AGGAAGTGTGCGGATCGAATATGAATCGGTGCACGGAAGTTGGCACCTATAAAATGACAT
TGCCGAAACGAGACACGATGAGCCCGTTAAGTCCGAAAAGAACTAAGGACCTGGACACTA
AGACACCGTTTCTGAAATCTTCGCCAGCTTGCAAGACCGATAAAAACAGCACGGAGAAGA
GAATTTCGGGCGAAAGTAGCAGTGACGATATATACGAGCATTTCCAACCGCAAGGCAGAG
ATCACAAAGGCGATATAGGAGCCAGGGGACCGCCGGAATGCCAACACCTTGCCGTGCAAG
ACACTACCTCCGGAATATACTACGAGTACTTCTCGTCTCCGCCCGTTTTATGCCGACAGC
CAGACCAGAGCCGCAAGTGCGCCAGACGTTCCGACGTCGTCAATCATAACGACCAGCCCG
AGATTAGCAGCGTGCTAGGCCGGGAAAACTCGATTCAAGAGGAATCAAACGAAACTGAAG
TGTGAC
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[22-46] 2.5E-45 - T[55-76] 2.5E-45 - T[100-122] 2.5E-45 - T[136-157] 2.5E-45 - T[206-229] 2.5E-45 - T[246-270] 2.5E-45 - T[291-317] 2.5E-45 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[37-309] 42.278 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[37-309] 1.8E-46 |
| ProSitePatterns |
GPCR_Rhodpsn (IPR000276) - T[106-122] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SSR1_HUMAN | 31.548 % | 155 | 1.52E-42 |
| APJ_HUMAN | 31.378 % | 155 | 8.02E-43 |
| AGTR1_HUMAN | 30.717 % | 145 | 3.92E-39 |