- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g21484.01.t
Possible name(s)
HMBS
Gene model
Location
chrUn [139,873,679 / 139,876,877]
Amino acid sequence
Length: 340
>Boschl.CG.Botznik2013.chrUn.g21484.01.p
MWQTEWVVDELKKLDKDLMIEIVPMSTTGDKILDKPLPKTGEKSLFTKELEHALALREVH
IVVNSMKDMPSTLPDNLTISAVAKRENPADAVVMHPKHRGKRLEDLEDGSVIGTSSLRRI
AQLKRKFPHLKYKSVRGNLNTRLRKLDEANDYSALILAAAGLKRMGWNDRISYTLDTEVF
MYAAGQGALAVETRADDVETIDLVSKLHDKHTVIQCIAERAFLRTLEGGCSVPTAVRTYI
KDDELYMKAGVYSLDGSEALVADMQTSLTPNEEWDRIMRSGDREASCEFASITTSYHFVS
PYLLKAAGHLGRDIAMLLVKKGARRVLDEARRQNLMSDSI
Nucleotide sequence
Length: 1,023
>Boschl.CG.Botznik2013.chrUn.g21484.01.t
TGTGGCAGACCGAATGGGTCGTGGACGAACTCAAGAAATTAGATAAAGATCTGATGATTG
AGATCGGTCCGATGTCCACTACCGGTGATAAAATTCTCGACAAACCATTGCCAAAAGCTG
GTGAGAAAAGTCTGTTCACGAAAGAACTGGAACACGCGTTAGCGTTGAGAGAAGTTCACA
TCGTTGTCAACTCCATGAAAGACATGCCTTCCACATTACCCGACAATTTAACCATTTCGG
CAGTAGCTAAGAGAGAAAATCCAGCGGACGCAGTGGTGATGCATCCGAAACATAGAGGAA
AGCGATTAGAAGACTTGGAGGATGGAAGGGTTATAGGTACAAGCTCGTTGCGTCGTATTG
CTCAATTGAAAAGGAAATTTCCGCATTTGAAATATAAAAGTGTACGGGGAAATTTGAACA
CGAGACTGCGAAAGCTGGATGAAGCCAACGATTACAGCGCCCTCATTCTGGCAGCGGCTG
GTTTGAAACGCATGGGATGGAATGACAGAATTTCATATACATTAGATGCGGAGGTATTCA
TGTATGCTGCCGGCCAGGGTGCTCTTGCGGTGGAAACACGGGCGGATGATGTAGAAACTA
TTGATCTGGTGTCAAAGCTTCACGACAAGCATACTGTTATACAGTGCATAGCAGAGAGGG
CCTTTCTGAGGACTCTGGAAGGAGGGTGCTCTGTTCCCACTGCGGTTCGTACGTACATTA
AAGACGACGAGGTCTATATGAAAGCCGGTGTGTACAGTTTGGATGGGTCCGAGGCCCTTG
TCGCGGATATGCAAACTTCGTTGACGCCAAATGAAGAATGGGACAGAATAGTGAGATCGG
GAGACAGGGAGGCGAGCTGCGAATTCGCAAGCATCACCACCAGCTACCACTTCGTCAGTC
CCTACTTGCTGAAAGCCGCCGGCCATCTCGGGCGAGACATCGCCATGCTGCTGGTGAAGA
AGGGCGCGCGCCGCGTGCTGGACGAGGCGCGGAGGCAGAATCTAATGAGCGATTCGATAT
GAG
| TIGRFAM |
HemC (IPR000860) - T[1-268] 1.1E-87 |
| PANTHER |
HemC (IPR000860) - T[1-335] 8.8E-114 |
| Pfam |
Porphobilin_deaminase_N (IPR022417) - T[1-200] 6.1E-69 |
| PIRSF |
HemC (IPR000860) - T[1-337] 9.7E-102 |
| PRINTS |
HemC (IPR000860) - T[29-49] 1.3E-44 - T[60-79] 1.3E-44 - T[111-128] 1.3E-44 - T[130-147] 1.3E-44 - T[218-235] 1.3E-44 |
| SUPERFAMILY |
Porphobilinogen_deaminase_C_sf (IPR036803) - T[208-273] 8.11E-17 |
| Gene3D |
Porphobilinogen_deaminase_C_sf (IPR036803) - T[209-336] 2.5E-32 |
| Pfam |
Porphobilinogen_deaminase_C (IPR022418) - T[214-266] 2.0E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HEM3_HUMAN | 56.156 % | 357 | 8.32E-123 |