Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phfumi.CG.MTP2014.S8...' > 
  2. Transcript 'Haaura.CG.MTP2014.S1...' > 
  3. Transcript 'Haaura.CG.MTP2014.S1...' > 
  4. Clone 'AHC0AAA229YO04' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g21432.01.t

Possible name(s)

RPRD1A; RPRD1B; RPRD2

Gene model

Boschl.CG.Botznik2013.chrUn.g21432

Location

chrUn [139,506,379 / 139,510,752]

Sequences

Amino acid sequence

Length: 226

>Boschl.CG.Botznik2013.chrUn.g21432.01.p
MFSLWIIHHKLHYKLIVDTWLNILKSSNTKHRLTLFYLANDVIQSCRRKKADQFREYFAT
VLPEAIALLRDKTISSGVERVLNVWSSRKIYDIDFIDQLHAALLTNRTPDTLRQKLLAEY
KPSSLVEKIEEFKKTEDLISTDEKQLKSINVDASSTDSIHKLKDXXXXXXGGEQYSKNFE
ESATNIERFIVQYEDLIEKRKQLIDELSQGAVFYGAQYHEAKIVVN

Nucleotide sequence

Length: 678

>Boschl.CG.Botznik2013.chrUn.g21432.01.t
CATGTTTTCACTCTGGATTATACACCATAAACTACACTACAAGCTCATCGTGGACACCTG
GCTAAACATACTGAAATCAGCAAACACAAAACACAGACTAACCTTGTTCTATTTGGCGAA
TGACGTTATACAATCGTGTCGCCGCAAGAAAGCTGACCAATTCAGGGAATATTTCGCTAC
TGTGTTACCAGAAGCTATAGCCTTGTTAAGAGACAAAACGATATCATCTGGAGTTGAACG
AGTCCTGAACGTCTGGTCGAGTCGGAAAATTTACGATATTGACTTCATAGACCAACTGCA
TGCGGCGTTACTCACTAATCGAACTCCCGATACACTACGACAGAAGCTACTCGCAGAGTA
CAAGCCCTCGTCTCTTGTTGAAAAAATCGAGGAATTCAAGAAGACAGAAGATCTGATTTC
GACCGACGAGAAACAGTTGAAAAGTATCAACGTGGACGCGTCCAGCACCGATAGTATTCA
TAAACTAAAAGACNNNNNNNNNNNNNNNNNCGGCGGCGAGCAATATTCGAAGAATTTTGA
GGAATCCGCCACCAACATCGAGCGGTTTATCGTGCAATATGAGGATTTGATCGAAAAGAG
GAAGCAGCTCATCGACGAATTGAGTCAGGGCGCCGTGTTTTACGGGGCGCAGTATCACGA
GGCTAAAATCGTCGTCAA

InterProScan

ProSiteProfiles
CID_dom (IPR006569) - T[1-107] 28.923
SMART
CID_dom (IPR006569) - T[2-104] 2.0E-12
Gene3D
ENTH_VHS (IPR008942) - T[2-116] 6.4E-31
SUPERFAMILY
ENTH_VHS (IPR008942) - T[3-107] 5.36E-13
Pfam
RNA_pol_II-bd (IPR006903) - T[32-91] 8.0E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RPRD2_HUMAN 37.849 % 181 2.11E-52
RPR1A_HUMAN 30 % 90.1 2.03E-21
RPR1B_HUMAN 37.838 % 86.3 4.92E-20