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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g19960.01.t
Possible name(s)
TUBA1A; TUBA1B; TUBA3C
Gene model
Location
chrUn [129,622,413 / 129,624,503]
Amino acid sequence
Length: 322
>Boschl.CG.Botznik2013.chrUn.g19960.01.p
KEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAI
YPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLV
GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI
TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
KVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE
KDYEEVGVDSVEGEGEEEGEEY
Nucleotide sequence
Length: 971
>Boschl.CG.Botznik2013.chrUn.g19960.01.t
TAAGGAAATCGTCGACCTTGTGCTCGACCGCATCCGAAAGCTGGCCGATCAGTGCACCGG
TCTTCAGGGTTTCCTGATCTTCCACTCCTTCGGAGGTGGTACCGGATCCGGATTCACCTC
TCTCCTCATGGAGCGTCTGTCCGTCGACTACGGCAAGAAGTCCAAGCTTGAGTTCGCCAT
CTACCCGGCGCCTCAGGTGTCAACCGCTGTTGTCGAACCGTACAACTCTATCCTGACCAC
CCACACCACCCTGGAACACTCCGACTGCGCCTTCATGGTCGACAACGAGGCCATCTACGA
CATTTGCCGAAGAAACTTGGACATCGAGAGACCGACCTACACCAACTTGAACCGTCTCGT
CGGACAGATCGTGTCTTCCATCACCGCTTCCCTGCGATTCGATGGTGCCCTCAATGTCGA
CTTGACTGGATTCCAGACCAACTTGGTGCCCTACCCGCGTATCCACTTCCCTCTGGCCAC
CTACGCTCCGGTCATCTCCGCCGAGAAGGCTTATCACGAACAACTGTCCGTTGCTGAAAT
CACCAACGCTTGCTTCGAGCCAGCGAACCAGATGGTGAAATGCGACCCGCGTCACGGCAA
GTACATGGCGTGCTGCATGTTGTACCGTGGTGATGTCGTCCCCAAGGACGTCAACGCCGC
CATTGCGACCATCAAGACCAAGCGTACCATCCAATTCGTGGACTGGTGCCCAACCGGTTT
CAAGGTCCAGAGAGCCGTGTGCATGTTGAGCAACACCACCGCTATCGCCGAGGCCTGGGC
CCGTCTTGATCACAAATTCGATTTGATGTACGCCAAGCGTGCTTTCGTCCACTGGTATGT
GGGAGAAGGTATGGAAGAAGGTGAATTCTCCGAGGCCCGTGAGGATTTGGCGGCTCTTGA
GAAGGACTACGAAGAAGTCGGTGTCGACTCCGTCGAGGGTGAAGGCGAAGAAGAAGGCGA
AGAATACTAAA
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-134] 2.49E-51 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[1-135] 7.5E-25 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-157] 4.5E-71 |
| PANTHER |
Tubulin (IPR000217) - T[1-242] 1.4E-218 - T[241-318] 1.4E-218 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[2-102] 5.3E-30 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[9-17] 6.4E-57 - T[37-49] 6.4E-57 - T[50-61] 6.4E-57 - T[103-115] 6.4E-57 - T[163-178] 6.4E-57 - T[231-250] 6.4E-57 - T[256-272] 6.4E-57 - T[293-309] 6.4E-57 |
| PRINTS |
Tubulin (IPR000217) - T[23-41] 2.1E-49 - T[42-63] 2.1E-49 - T[67-80] 2.1E-49 - T[81-101] 2.1E-49 - T[251-279] 2.1E-49 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[31-37] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[135-308] 1.8E-77 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[137-264] 1.1E-48 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[152-262] 1.2E-41 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[158-254] 1.8E-51 |
| Gene3D |
Tubulin_C (IPR023123) - T[255-321] 8.0E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 92.941 % | 657 | 0 |
| TBA1B_HUMAN | 92.353 % | 653 | 0 |
| TBA3C_HUMAN | 92.941 % | 645 | 0 |