Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g18079.01.t

Possible name(s)

CNOT7; CNOT8

Gene model

Boschl.CG.Botznik2013.chrUn.g18079

Location

chrUn [117,454,623 / 117,461,294]

Sequences

Amino acid sequence

Length: 295

>Boschl.CG.Botznik2013.chrUn.g18079.01.p
MSRIICSFVFHYLSAISSSFSLRWKMANVASNTKEEPIVEVWNSNVDEEYKKIRKLIHHY
PYVSMDTEFPGVVARPIGEFRSNADYQYQLLKCNVDMLKIIQLGLSFMNEKGEKPSGVST
WQFNFKFSLNEDMYAQESIDLLQGSGIQFKQHEEEGIEPLYFAELLMTSGIVLMDEVKWV
TFHSGYDFGYLLKILTNNTLPQEESEFFELIGIFFPNIYDVKYLMKSCKNLKGGLQEVAQ
QLELDRIGSQHQAGSDSLLTGQLFFKMREVGCRDVFARYQIAIFRRHLKRALVLF

Nucleotide sequence

Length: 888

>Boschl.CG.Botznik2013.chrUn.g18079.01.t
TGTCCCGAATTATTTGCAGCTTTGTATTTCATTATTTGAGTGCTATCAGCAGTAGTTTCT
CGCTGCGTTGGAAAATGGCCAACGTAGCTTCAAACACGAAGGAAGAGCCGATTGTTGAAG
TATGGAACTCAAACGTTGATGAGGAATATAAGAAGATCAGAAAGTTGATTCACCATTACC
CTTATGTGTCGATGGACACAGAATTCCCGGGCGTTGTTGCTCGGCCCATTGGTGAATTTC
GAAGCAATGCGGATTACCAATATCAACTCCTCAAGTGCAATGTTGATATGCTGAAAATCA
TTCAGTTGGGACTCTCATTTATGAATGAAAAAGGCGAAAAACCATCCGGCGTGTCGACTT
GGCAATTTAATTTCAAGTTCAGCTTGAAGGAAGATATGTACGCTCAAGAATCGATAGACC
TTTTGCAAGGCAGTGGAATACAATTCAAGCAACATGAAGAAGAAGGAATCGAACCGCTGT
ATTTTGCCGAGCTGTTGATGACCTCTGGAATCGTATTGATGGACGAGGTCAAATGGGTGA
CGTTCCACAGGGGGTACGACTTTGGTTATCTTCTCAAGATACTGACAAACAACACCCTGC
CTCAGGAAGAAAGCGAATTCTTCGAGCTCATCGGCATATTCTTTCCAAATATTTACGACG
TCAAATACCTCATGAAGAGCTGCAAAAATCTGAAGGGCGGTCTTCAAGAGGTAGCGCAAC
AGCTGGAACTAGACAGGATCGGTTCCCAGCATCAAGCCGGCAGCGACAGTCTTTTAACCG
GGCAACTGTTCTTCAAGATGAGAGAGGTAGGGTGCCGCGATGTTTTTGCCAGATACCAAA
TTGCGATATTCCGAAGACATCTGAAACGGGCTCTTGTGTTGTTTTGAG

InterProScan

Gene3D	RNaseH_sf (IPR036397) - T[26-288] 4.2E-115
SUPERFAMILY	RNaseH-like_sf (IPR012337) - T[37-270] 5.31E-92
Pfam	RNase_CAF1 (IPR006941) - T[41-158] 1.6E-11 - T[173-264] 1.2E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNOT7_HUMAN	76.033 %	388	4.2E-137
CNOT8_HUMAN	72.532 %	375	1.29E-131