- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g17743.01.t
Possible name(s)
HMCN1; KIRREL1; KIRREL2
Gene model
Location
chrUn [115,215,366 / 115,221,583]
Amino acid sequence
Length: 485
>Boschl.CG.Botznik2013.chrUn.g17743.01.p
PPKGPFIENAAKDGSLNVMADTENLLTCKSTNGKPAGALAWYKDGVELSKNVTFDEVSTS
GGKLLNSSAILKLWSTSNDDGKRYQCRMKIDGRFLGNNGVEDLNPAVAVKINVQSKERNP
PRLIGFYITYDRCDLIVMQYTRLTTDQDPPTLKSAPKHVTTEFPAVANMSCSWESNPPAR
ITWYKRGEMNAVLSQGEYLEIDVRDQSAAGVYVCFGDAYGTWSWKRDGTVMTLESNGTTA
VGGKEKYAAAVGYGDFTATLIVDDATQEDFTDYNCTVSNSYGRALATVKLQACYTRLYQP
RHRKSDVQLHTHISHVPCLICDWRKRSRLRFQDSILVPLKSYATHTSNTFVYRKMNAISY
TTLYITEQIAARTAMTTPVMVAIIAGAALLVAILLLIAVCCVRKKRQEKSTTFPPVQDAA
QVDGRQSTKENTREDAILTTKLLNPDEDGQPSSSASVVSHDIEGNRIGDVHKLAHNDDGY
HTEGD
Nucleotide sequence
Length: 1,460
>Boschl.CG.Botznik2013.chrUn.g17743.01.t
TCCTCCAAAGGGTCCGTTCATCGAAAACGCCGCAAAGGACGGATCGCTCAACGTGATGGC
GGACACCGAAAATCTTTTAACTTGCAAATCTACTAATGGCAAACCAGCCGGCGCTCTTGC
TTGGTACAAAGGCGGCGTGGAACTCTCGAAAAATGTTACCTTCGATGAAGTGTCCACAAG
CGGTGGCAAGTTACTAAACAGCAGCGCCATCTTGAAGTTGTGGTCTACGTCGAACGATGA
TGGGAAAAGGTACCAATGCAGGATGAAAATCGATGGCAGGTTTCTGGGAAACAATGGCGT
TGAAGATCTCAACCCTGCTGTTGCCGTTAAGATAAACGTTCAAAGTAAGGAGAGGAATCC
ACCCCGATTGATTGGCTTTTATATAACTTATGATCGGTGTGACCTCATCGTTATGCAGTA
TACTCGCTTAACCACAGACCAAGGTCCGCCAACACTGAAGTCGGCGCCTAAACACGTGAC
CACCGAATTTCCCGCCGTTGCGAACATGTCTTGCTCTTGGGAATCCAACCCGCCGGCGCG
CATCACTTGGTACAAAAGAGGGGAGATGAACGCGGTGTTGAGCCAAGGGGAGTACCTCGA
AATCGATGTGAGGGACCAAAGCGCCGCGGGAGTGTACGTGTGCTTCGGGGACGCGTACGG
GGCCTGGTCTTGGAAAAGGGACGGAACGGTGATGACGCTGGAAAGCAACGGAACTACGGC
TGTCGGCGGCAAAGAAAAATACGCGGCGGCTGTGGGTTACGGCGATTTCACTGCCACCTT
GATTGTTGATGATGCGACGCAAGAAGATTTCACTGACTACAACTGCACCGTTTCCAACTC
GTATGGCCGCGCGTTGGCCACTGTCAAGTTACAAGGATGCTATACTCGACTTTACCAGCC
TCGCCATAGAAAATCCGATGTACAGCTGCACACTCACATCTCGCATGTGCCGTGTCTGAT
TTGCGATTGGCGCAAACGAAGTCGACTAAGATTTCAGGACTCAATTCTCGTTCCTTTGAA
ATCCTACGCGACCCATACATCGAACACATTCGTGTATCGAAAGATGAACGCGATTAGTTA
CACCACGTTGTACATTACAGAGCAAATAGCCGCGAGAACTGCCATGACAACGCCAGTGAT
GGTAGCTATCATAGCGGGTGCCGCGCTGCTGGTCGCCATCCTACTGCTAATCGCCGTTTG
CTGCGTGCGGAAAAAGCGGCAGGAAAAATCGACAACGTTTCCCCCAGTGCAAGACGCGGC
GCAAGTTGACGGTCGGCAGTCGACGAAAGAGGATACCCGGGAGGACGCTATATTGACTAC
AAAACTGCTCAACCCCGACGAGGACGGCCAGCCGTCGTCTTCGGCTTCTGTGGTCTCGCA
CGATATCGAAGGCAATCGCATCGGAGACGTTCACAAGCTAGCACACAACGACGATGGCTA
CCACACTGAAGGTGACTAGT
| Gene3D |
Ig-like_fold (IPR013783) - T[1-111] 6.8E-13 - T[151-216] 2.6E-6 - T[217-293] 2.9E-8 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[2-87] 3.73E-10 - T[145-291] 5.43E-16 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[5-88] 9.283 - T[150-291] 9.41 |
| Pfam |
CD80_C2-set (IPR013162) - T[13-89] 1.1E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|
