- Transcript 'Phfumi.CG.MTP2014.S9...' >
- Transcript 'KH2012:KH.C3.297.v2....' >
- Molecular Tool 'Ci-GATAb MO (Ogura 2016)' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g17072.01.t
Possible name(s)
RASSF2; RASSF4; RASSF6
Gene model
Location
chrUn [110,544,629 / 110,550,398]
Amino acid sequence
Length: 205
>Boschl.CG.Botznik2013.chrUn.g17072.01.p
MASSLMLSPIFTNAEPVSKEVYLYFEELLMQDSGVKIRPQSDLATVQADAVRKFEERTTG
LPTSVFTPAYASVTNVRVTSKSSCDDVIQHLLNKFRIENSYEEFSLFLVKQTGERRELAR
NEYPLVTRVLSGPNEQFCKIFVMDRNMHEDISSDVAQYFKLDINILQMFVKKFTEEEERE
AAKLKQRYQMYRTVLEKRIQEVSAS
Nucleotide sequence
Length: 618
>Boschl.CG.Botznik2013.chrUn.g17072.01.t
AATGGCGTCTTCGTTGATGCTTTCACCAATATTCACCAATGCAGAGCCTGTCAGTAAAGA
AGTATACTTATATTTTGAAGAGCTTCTGATGCAAGACAGCGGGGTGAAAATCAGACCGCA
GAGCGACCTCGCAACGGTTCAAGCGGACGCGGTTCGCAAATTCGAAGAAAGAACGACCGG
TTTGCCGACTTCCGTTTTCACGCCCGCCTACGCGTCCGTCACCAACGTCCGGGTAACGAG
TAAGTCGAGTTGCGACGACGTCATCCAGCACTTGCTGAATAAGTTCCGAATAGAGAATAG
CTACGAAGAATTTTCTCTGTTTCTCGTCAAACAAACAGGAGAGCGTAGGGAGCTGGCCAG
GAACGAGTATCCGCTCGTGACGCGGGTCTTGTCGGGACCTAACGAACAGTTTTGTAAGAT
TTTCGTGATGGACCGTAACATGCACGAGGACATATCGAGCGACGTTGCACAGTATTTCAA
GTTGGACATCAATATTTTGCAAATGTTCGTCAAGAAGTTCACGGAGGAAGAGGAACGCGA
GGCCGCGAAATTGAAGCAACGGTACCAGATGTACAGAACGGTTCTTGAAAAGCGGATCCA
AGAAGTTTCAGCGTCGTG
| PANTHER |
C-RASSF (IPR033614) - T[46-203] 1.3E-57 |
| SMART |
RA_dom (IPR000159) - T[57-148] 1.7E-5 |
| ProSiteProfiles |
RA_dom (IPR000159) - T[59-147] 15.396 |
| Pfam |
RA_dom (IPR000159) - T[64-138] 5.7E-12 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[75-139] 5.34E-8 |
| ProSiteProfiles |
SARAH_dom (IPR011524) - T[155-202] 11.381 |
| Pfam |
SARAH_dom (IPR011524) - T[165-198] 1.2E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RASF2_HUMAN | 46.154 % | 149 | 3.2E-44 |
| RASF4_HUMAN | 45.714 % | 110 | 2.05E-29 |
| RASF6_HUMAN | 40.58 % | 116 | 4.62E-31 |