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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  2. Transcript 'Boleac.CG.SB_v3.S216...' > 
  3. Transcript 'Haaura.CG.MTP2014.S6...' > 
  4. Transcript 'KH2012:KH.L153.22.v2...' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g16343.01.t

Possible name(s)

DNAJC7; SPAG1; TTC4

Gene model

Boschl.CG.Botznik2013.chrUn.g16343

Location

chrUn [105,893,862 / 105,896,617]

Sequences

Amino acid sequence

Length: 402

>Boschl.CG.Botznik2013.chrUn.g16343.01.p
MASKGTVEDRRSLAEKLDADIDQMFDDMIKKNAGKKRKEEFSEEAFDEVLNTHPAFMNKT
PTQEEIDQNPLLQGLQQLRYEDAEDTPEDQALAYKDDGNWHFKHKLYAKAVRAYTGGLLK
KPSDNELTCTLYANRAAANFYLKNFRSSYLDSMEALKLQPNKIKSLMRCAQCCAELSKYA
DAIVWLKKTLSVNPQHSAAKEMLQNVQRDMKTAERDKRKKEREEKARGAKTKALIEAIRN
RGIKLNFANIKRSNDDNHLSLEDALIRRSVDNGNPSHAKVHFENDTATPGKLVWPVLFTY
PEHEVSEIIEQFSEDNTFLDHLEIMFEEKAPWDEESNYALENLEVYHEFGVGCLRLVDSS
RTLQDVLSSGEIVVTAGTPVFIVLCKVSPYRNIFLSKYSVRH

Nucleotide sequence

Length: 1,209

>Boschl.CG.Botznik2013.chrUn.g16343.01.t
TGGCTTCTAAGGGCACGGTGGAAGACCGGAGAAGTCTTGCGGAGAAACTGGACGCCGACA
TCGATCAGATGTTTGACGATATGATTAAAAAGAACGCCGGCAAGAAGCGCAAAGAGGAAT
TCAGTGAGGAGGCTTTCGATGAGGTTTTGAACACACATCCCGCTTTTATGAACAAGACTC
CTACGCAAGAAGAGATCGACCAAAATCCATTGTTGCAGGGTTTGCAACAGCTGAGGTACG
AAGATGCCGAAGACACTCCAGAAGATCAGGCTCTCGCCTACAAGGATGATGGCAATTGGC
ACTTCAAACACAAACTATATGCAAAGGCAGTGAGGGCCTACACTGGCGGGTTGCTGAAAA
AACCCTCCGACAATGAACTGACTTGTACTTTGTACGCCAATCGTGCAGCAGCTAATTTTT
ACCTGAAGAATTTCCGCTCTTCCTACCTGGATTCCATGGAGGCCCTGAAACTGCAACCTA
ACAAGATCAAGTCGCTTATGCGTTGCGCGCAATGCTGTGCGGAGCTCTCGAAGTACGCGG
ACGCGATCGTATGGCTCAAAAAAACACTGTCGGTGAACCCGCAACACTCCGCCGCCAAGG
AGATGCTGCAAAACGTACAGCGTGACATGAAAACGGCTGAGCGCGACAAGAGAAAGAAAG
AACGCGAAGAAAAGGCTCGCGGCGCAAAAACAAAGGCCTTAATTGAAGCTATCCGTAACC
GGGGGATAAAACTGAATTTTGCAAATATCAAAAGGTCGAATGATGACAATCACTTGTCCC
TCGAGGACGCCTTGATACGTCGGAGCGTCGATAATGGCAATCCTTCGCACGCCAAAGTTC
ATTTCGAAAACGACACAGCCACGCCTGGCAAATTAGTGTGGCCTGTGCTGTTCACGTACC
CCGAACACGAAGTGTCTGAAATCATTGAGCAGTTTTCTGAAGACAACACGTTTCTTGACC
ATCTCGAAATCATGTTCGAGGAGAAAGCACCTTGGGACGAGGAGAGTAATTACGCCTTGG
AAAATTTGGAAGTGTATCATGAATTTGGTGTCGGCTGTCTGAGGCTTGTGGACTCGAGCA
GGACTCTGCAAGATGTTTTGTCTAGCGGGGAGATTGTCGTTACTGCCGGCACGCCGGTCT
TTATCGTTTTGTGCAAAGTTTCACCGTATCGCAATATCTTTTTGTCTAAATACTCGGTGA
GGCATTGAT

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[80-242] 3.5E-24
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[83-212] 1.46E-20
SMART
TPR_repeat (IPR019734) - T[91-124] 87.0 - T[129-162] 48.0 - T[163-196] 0.63
ProSiteProfiles
TPR-contain_dom (IPR013026) - T[91-196] 12.124

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TTC4_HUMAN 36.412 % 224 1.14E-69