- Transcript 'Haaura.CG.MTP2014.S4...' >
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- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C2.199.v1....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g16202.01.t
Possible name(s)
NUBP1; NUBP2; POLR2I
Gene model
Location
chrUn [105,096,541 / 105,098,911]
Amino acid sequence
Length: 431
>Boschl.CG.Botznik2013.chrUn.g16202.01.p
MSEKPENANDHCPGTDSKDAGKSSACAGCPNQTICASSVPKPPDPDIDVIKERLANVKHK
VLILSGKGGVGKTTVTSHLAYGLAMDEDTQVGVLDVDICGPSVPVVMGLAGEQVHNSGSG
WSPVYVQDNLAVMSAGFLLASAKDAVIWRGPKKNGLIKQFLRDVDWEDMDFLLVDTPPGT
SDEHLSVVQYLKKAKIDGAVIVTTPQEVALNDVRKEINFCRKVDLPIIGVVENMSWFVCP
KCTKTSEIFPPTLGGAEAMAKNMGVPFLGKVPLDPRLARCCDEDTLKISLIFSVKPLGAN
SGNMTEEAMQQKGPGFVGIKFCQECNNMLYPKEDKQNRILLYSCRNCDFQMEADNACIYV
NKIVHEVDELTQIIADVAQDPTLPRTKDHSCPKCSHKEAVFFQSQSTRAEEGMRLYFVCT
SLHCGNRWTQL
Nucleotide sequence
Length: 1,296
>Boschl.CG.Botznik2013.chrUn.g16202.01.t
TGTCAGAAAAACCAGAAAATGCCAACGATCATTGTCCTGGCACCGACAGTAAGGATGCCG
GCAAGTCATCTGCATGCGCTGGCTGTCCGAACCAGACCATCTGTGCGTCATCAGTGCCAA
AGCCCCCAGACCCCGACATCGATGTGATCAAGGAACGTCTCGCCAACGTGAAACACAAGG
TCTTGATATTATCCGGAAAAGGCGGAGTAGGAAAAACCACTGTGACTTCACATTTGGCCT
ACGGCCTGGCGATGGATGAAGACACTCAAGTCGGTGTTTTGGATGTTGATATATGTGGTC
CGTCAGTGCCTGTAGTCATGGGTCTAGCTGGTGAGCAAGTGCACAATAGTGGGTCTGGAT
GGTCTCCGGTTTACGTGCAAGATAATTTAGCCGTGATGTCCGCGGGTTTTTTACTAGCGA
GCGCAAAGGACGCAGTGATATGGCGAGGACCAAAGAAGAATGGGCTTATCAAACAGTTTT
TGCGCGACGTAGACTGGGAAGACATGGACTTTTTATTAGTAGACACACCGCCCGGCACTT
CAGACGAACATCTCTCCGTCGTGCAATACTTGAAGAAAGCAAAAATTGATGGAGCGGTCA
TTGTTACCACGCCACAAGAGGTGGCGTTGAACGACGTTAGAAAAGAAATTAATTTTTGCC
GCAAAGTCGACCTGCCTATCATCGGCGTAGTCGAGAATATGAGCTGGTTCGTTTGTCCCA
AATGTACAAAGACTTCGGAGATATTTCCGCCCACCTTAGGAGGGGCGGAAGCTATGGCTA
AAAATATGGGCGTTCCTTTTCTTGGTAAAGTTCCCTTGGACCCTAGACTGGCTAGGTGTT
GCGATGAAGGTACTTTAAAAATTAGTTTGATCTTCTCTGTCAAACCACTCGGAGCAAATT
CAGGAAATATGACGGAAGAGGCCATGCAACAGAAAGGCCCCGGTTTTGTGGGAATCAAAT
TTTGTCAAGAATGGAATAACATGCTCTATCCAAAAGAAGACAAACAGAACAGAATCCTTC
TTTATTCGGGCAGGAACTGTGATTTTCAAATGGAAGCCGACAACGCCTGTATCTACGTCA
ATAAAATTGTGCACGAAGTCGATGAATTGACACAGATTATCGCAGATGTAGCCCAGGATC
CTACGTTGCCAAGAACCAAAGACCACTCCTGCCCCAAGTGTTCACACAAGGAGGCGGTGT
TTTTCCAGTCTCAGTCTACTAGGGCCGAAGAAGGAATGAGGCTATACTTTGTCTGTACTA
GTCTACATTGTGGTAACAGATGGACTCAGTTATGAA
| PANTHER |
Mrp/NBP35_ATP-bd (IPR019591) - T[3-284] 2.1E-149 - T[389-406] 2.1E-149 |
| Hamap |
NUBP1/Nbp35 (IPR028601) - T[5-317] 48.056 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[42-283] 1.34E-55 |
| Hamap |
Mrp/NBP35_ATP-bd (IPR019591) - T[52-309] 36.0 |
| Pfam |
YlxH/NBP35 (IPR033756) - T[56-285] 2.9E-93 |
| CDD |
Mrp/NBP35_ATP-bd (IPR019591) - T[60-275] 8.2533E-92 |
| ProSitePatterns |
Mrp_CS (IPR000808) - T[166-182] . |
| Pfam |
DNA-dir_RNA_pol_M/15kDasu (IPR001529) - T[319-354] 2.6E-12 |
| SMART |
DNA-dir_RNA_pol_M/15kDasu (IPR001529) - T[320-373] 3.4E-21 |
| ProSitePatterns |
DNA-dir_RNA_pol-M_15_CS (IPR019761) - T[321-347] . |
| CDD |
Zn_ribbon_RPB9_C (IPR034012) - T[379-429] 3.71855E-28 |
| ProSiteProfiles |
Znf_TFIIS (IPR001222) - T[387-429] 13.783 |
| SMART |
Znf_TFIIS (IPR001222) - T[389-430] 4.7E-14 |
| Pfam |
Znf_TFIIS (IPR001222) - T[389-429] 6.0E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NUBP1_HUMAN | 68.551 % | 419 | 2.28E-146 |
| NUBP2_HUMAN | 52.155 % | 263 | 8.37E-86 |
| RPB9_HUMAN | 82.051 % | 222 | 3.2E-72 |