Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g16091.01.t

Possible name(s)

GBA2

Gene model

Boschl.CG.Botznik2013.chrUn.g16091

Location

chrUn [104,316,791 / 104,318,993]

Sequences

Amino acid sequence

Length: 625

>Boschl.CG.Botznik2013.chrUn.g16091.01.p
RRNGETIYQKVLSPDFSQQKNLKSWDWDFPANQAFYHALYPRAWTVYEIPHLGLVLTCRQ
ISPVIPHEYKDSSIPTVVFSWHIQNTSDHNYQVSIVLTMENGIGTKAARSAEDMPVVYFG
SKESSHFRRYTRYFGSDGNAGHKITIYALKNYIKWEEQIESWQSPILSNENLPNWYKSAL
FNELYYITDGGTIWLEIPNSIDSSENHEQSSSSSVSAQYLQNSSIILEYGRFGYLEGHEY
RMYNTYDAHFHASIALAHLWPNLEFSLQYDIAASILQTDNTSFQFLMNGNIGPVKSPDVV
PHDLGDPEDEPWKRVNAYFVHDTATWMDLNPKFVLQVFRDYYITKNKEFLKDMWPVCLKV
MSKSMKHDIDGDGLIESKGDADHTFYWWRMKGSSAYCGGLWLGALRCIVEAGQILGQQQE
VEQYKETLNLAAKSYQEKLWNGKYFNYCSNRSIKHCDSIMADQCAGQWYLLACDIADVLP
PEQVTRSLKTVYEFNVQGFAEGKRGAVNGMRPNKEIDLSCIQAEEAWSGVTYALSATMIH
KGMTDEGFKTAEGMYKSVWEDLGMAFQTPAAILKHKEYRSLAYMRSLSIWGMQYALEHVS
KTRTECVNKMYVSGNEVASDIKTSF

Nucleotide sequence

Length: 1,879

>Boschl.CG.Botznik2013.chrUn.g16091.01.t
CGACGTAATGGAGAAACCATCTATCAAAAGGTTCTTAGTCCAGATTTTAGCCAGCAAAAG
AATCTTAAATCATGGGATTGGGATTTTCCAGCAAATCAAGCATTTTATCATGCTCTCTAC
CCTCGTGCATGGACTGTGTATGAAATACCTCATCTTGGTCTTGTACTAACTTGCCGTCAA
ATATCACCCGTCATACCCCATGAATATAAAGATTCCAGCATACCCACGGTGGTCTTCTCT
TGGCACATTCAAAACACTTCAGATCACAATTATCAAGTCTCAATCGTTCTCACCATGGAA
AATGGGATTGGTACGAAAGCTGCTCGTTCAGCTGAAGGCATGCCTGTCGTGTATTTTGGA
TCTAAAGAGTCCTCACATTTTCGAAGGTACACACGTTACTTTGGATCTGATGGCAACGCG
GGGCATAAAATCACAATTTATGCACTCAAGAACTACATAAAGTGGGAGGAACAAATTGAA
AGTTGGCAAAGTCCGATATTATCAAACGAAAATTTGCCAAACTGGTACAAATCTGCTCTG
TTCAATGAACTCTATTACATCACAGATGGGGGAACAATCTGGCTGGAAATCCCAAATTCC
ATCGATTCGTCTGAAAATCATGAACAAAGCAGTTCTTCGTCTGTATCGGCACAATATCTG
CAAAATTCCAGCATCATTCTAGAATATGGTCGTTTCGGATACCTTGAAGGACATGAGTAC
CGAATGTATAACACCTACGACGCTCATTTCCATGCTTCAATTGCACTAGCACATCTCTGG
CCAAACTTGGAATTCAGCCTCCAATATGACATTGCTGCTAGTATCCTACAGACTGACAAC
ACATCATTCCAGTTCCTCATGAATGGAAACATTGGACCTGTTAAATCGCCAGATGTTGTT
CCGCATGATCTCGGTGATCCTGAAGACGAACCATGGAAACGTGTTAACGCTTATTTTGTC
CACGATACCGCCACCTGGATGGATTTGAATCCGAAATTTGTCTTACAAGTATTCCGAGAC
TACTACATCACAAAGAACAAAGAGTTTTTGAAGGACATGTGGCCTGTGTGTCTGAAGGTA
ATGTCAAAGAGCATGAAACATGATATCGACGGGGACGGACTGATCGAAAGCAAAGGAGAC
GCAGATCATACGTTTTACTGGTGGAGAATGAAGGGCTCCAGTGCTTACTGCGGAGGGTTA
TGGCTCGGTGCGCTGCGTTGTATTGTGGAGGCAGGGCAAATTCTTGGTCAGCAACAAGAA
GTAGAACAATACAAAGAAACATTGAATTTAGCTGCAAAATCCTACCAGGAAAAACTCTGG
AATGGTAAATACTTCAATTACTGTAGCAATCGAAGTATCAAACATTGCGACAGCATCATG
GCAGATCAATGCGCAGGGCAGTGGTATCTTCTGGCATGTGATATCGCTGACGTCCTCCCT
CCAGAACAAGTCACCCGATCATTGAAAACAGTCTACGAGTTCAATGTGCAGGGGTTTGCT
GAAGGAAAACGTGGAGCTGTTAATGGGATGCGACCAAACAAAGAGATTGATCTATCATGC
ATACAAGCAGAAGAGGCCTGGTCAGGTGTGACTTATGCGCTTTCTGCCACTATGATTCAC
AAAGGCATGACAGATGAAGGCTTCAAGACCGCAGAAGGGATGTATAAAAGTGTTTGGGAA
GACTTGGGGATGGCTTTCCAAACTCCAGCAGCTATTTTGAAACATAAGGAGTATAGGTCT
CTTGCTTACATGCGCTCTCTTAGTATCTGGGGTATGCAGTATGCACTGGAGCACGTTTCT
AAGACTCGCACTGAATGTGTGAACAAAATGTATGTTTCTGGAAATGAAGTAGCTTCTGAC
ATCAAGACCTCTTTTTGAG

InterProScan

Pfam	GH116_N (IPR024462) - T[3-108] 1.2E-40
SUPERFAMILY	6-hairpin_glycosidase_sf (IPR008928) - T[155-184] 4.69E-34 - T[223-571] 4.69E-34
Pfam	GH116_catalytic (IPR006775) - T[230-592] 1.3E-155
Gene3D	6hp_glycosidase-like_sf (IPR012341) - T[292-598] 4.0E-20

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
GBA2_HUMAN	53.719 %	551	0