- Transcript 'Cisavi.CG.ENS81.R268...' >
- Transcript 'KH2012:KH.C1.404.v1....' >
- Transcript 'Cisavi.CG.ENS81.R268...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g15707.01.t
Possible name(s)
DDX27; DDX47; DDX54
Gene model
Location
chrUn [101,462,869 / 101,471,724]
Amino acid sequence
Length: 576
>Boschl.CG.Botznik2013.chrUn.g15707.01.p
MDGRDVVAMARTGSGKTAAFLIPLFEKLQTRSSKAGARGLLLSPTRELALQTLQFIKEVR
ILWISRLKERSGVLLIVENVMKMVIMIFFVKFVFFENKLFLLCYGNYMPVVHVGEHGIVL
TLSFKTKFEKWPATRFELATPALDISCCGSVDVSMIFAGPMSWIIFQLGRFSSLKSACVL
GGDKMDDQFEALHGNPDIIVATPGRLMHVLVEMNLRLTNVEYLVFDEADRLFELGFQDQL
HEIMSRLPSDRQTLLFSATLPKQLVEFARAGLNDPTLIRLDVDSKLSDQLKLSFLHVRNE
DKPAILVHMLRMIVKPHEQTVVFAATKHHVEHLRLLLARCGIDCSYVYSSLDQTERKINI
GKFRNKKTMVLLVTDVAARGLDIPMLDNAINFNFPAKSKLFVHRVGWDDLFGKAPQVVID
DENTTLRIYSEENDLTSLSKVSDNAYKQYLRSRPSASSESIKRAKSIIEDKNIGIHPSYN
SVIDTSEELRLQLLNSMKSYKPSNTIFEIGSTAKSSSFKVMQATRKQNEKAIEQYQQKKL
EKRLRNADETSPSQHSSNSVTAEEYHSLMGKGADEL
Nucleotide sequence
Length: 1,728
>Boschl.CG.Botznik2013.chrUn.g15707.01.t
AATGGACGGCAGGGATGTCGTTGCCATGGCTAGAACTGGCAGCGGGAAGACTGCGGCCTT
TCTGATCCCGTTGTTTGAGAAGCTGCAGACGAGAAGTAGCAAGGCCGGCGCCCGTGGCCT
GCTTCTGTCGCCTACGAGAGAATTGGCTCTCCAGACCCTGCAGTTCATCAAAGAGGTGAG
AATCTTGTGGATTAGTCGTTTGAAAGAGCGGTCAGGTGTGCTGCTCATAGTTGAAAATGT
AATGAAAATGGTGATCATGATATTTTTTGTTAAATTTGTATTTTTTGAAAATAAATTATT
TCTTTTGTGTTATGGTAACTATATGCCAGTCGTTCATGTTGGAGAGCACGGCATCGTACT
GACATTAAGTTTTAAAACGAAATTTGAAAAGTGGCCCGCGACCCGATTCGAGTTGGCGAC
CCCTGCTCTAGATATAAGCTGTTGCGGTAGCGTTGATGTTTCCATGATTTTTGCTGGTCC
AATGTCTTGGATTATTTTCCAGTTAGGACGTTTCTCGAGTCTGAAATCGGCGTGCGTTCT
TGGCGGAGATAAGATGGACGATCAGTTTGAAGCTCTTCACGGCAATCCGGATATAATCGT
AGCGACCCCCGGTCGGCTGATGCACGTACTGGTGGAGATGAACCTGCGCCTGACCAATGT
GGAGTATCTGGTTTTTGACGAAGCGGACAGGTTATTCGAATTGGGATTCCAGGACCAGTT
GCACGAGATCATGTCGAGGCTCCCGTCGGACCGGCAGACTTTGCTGTTTTCCGCGACGCT
TCCGAAACAGCTGGTCGAATTCGCCAGGGCCGGACTCAACGATCCCACACTGATCAGGCT
GGACGTCGATTCGAAACTTAGCGATCAGCTGAAGTTGTCGTTTCTCCACGTTCGTAACGA
GGACAAGCCGGCCATCCTGGTGCACATGCTTCGTATGATCGTCAAGCCGCACGAGCAGAC
GGTCGTGTTTGCAGCTACGAAACATCACGTCGAACATTTGCGACTGCTCCTGGCTCGTTG
CGGGATCGATTGCTCGTACGTGTACAGCAGCCTCGATCAGACCGAGCGGAAGATTAACAT
CGGGAAATTTCGCAACAAGAAGACGATGGTTTTGCTTGTGACAGACGTCGCCGCCAGAGG
CTTGGATATTCCGATGCTGGACAATGCGATCAATTTCAATTTCCCGGCAAAGTCGAAGCT
TTTTGTTCACAGAGTCGGTTGGGACGACTTGTTCGGCAAAGCACCACAAGTGGTTATCGA
CGACGAAAACACGACTTTAAGGATATATTCGGAGGAAAACGACCTTACCAGCTTGTCAAA
GGTGTCCGATAATGCGTATAGGCAATATTTACGATCGCGACCTTCGGCGTCATCGGAATC
GATCAAGCGGGCGAAGTCAATTATAGAGGACAAAAATATCGGAATTCATCCGTCTTACGA
TAGCGTCATCGATACGTCGGAGGAGCTGAGGTTGCAGCTTCTCAACAGCATGAAATCCTA
CAAACCATCGAAGACAATTTTCGAAATCGGCTCCACCGCCAAGTCTTCCAGCTTCAAAGT
CATGCAAGCGACGAGGAAGCAAAACGAGAAGGCCATCGAGCAATATCAGCAGAAGAAATT
AGAAAAACGACTGCGCAATGCTGACGAGACGAGCCCGTCGCAACACAGTAGTAACAGCGT
TACGGCTGAAGAGTATCACTCGTTAATGGGTAAAGGCGCTGACGAACT
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[1-278] 27.454 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[1-298] 3.4E-35 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[2-57] 5.27E-50 - T[178-406] 5.27E-50 |
| PANTHER |
DDX54/DBP10 (IPR033517) - T[2-406] 1.4E-119 - T[417-531] 1.4E-119 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[2-60] 1.7E-14 - T[170-264] 2.2E-22 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[224-232] . |
| CDD |
Helicase_C (IPR001650) - T[294-406] 9.36471E-24 |
| Pfam |
Helicase_C (IPR001650) - T[302-406] 1.0E-17 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[305-461] 14.383 |
| SMART |
Helicase_C (IPR001650) - T[331-409] 5.0E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 32.472 % | 151 | 1.18E-38 |
| DDX47_HUMAN | 32.937 % | 149 | 4.0E-39 |
| DDX54_HUMAN | 49.522 % | 412 | 4.62E-134 |